Genomic Location: not available for this species
NR annotation: PFX19425.1, Collagen alpha-5(VI) chain [Stylophora pistillata]
Species abbreviation AMYRI · all data for this species · gene families
| CDS |
| g24352.t1 |
| Transcript |
| g24352.t1 |
| Protein |
| g24352.t1.1 |
| UniProt accession | Description |
|---|---|
| A6NMZ7 | Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 PE=1 SV=2 |
| Q8C6K9 | Collagen alpha-6(VI) chain OS=Mus musculus OX=10090 GN=Col6a6 PE=1 SV=2 |
| A8TX70 | Collagen alpha-5(VI) chain OS=Homo sapiens OX=9606 GN=COL6A5 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001078 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13385 all species → | Laminin_G_3 | Concanavalin A-like lectin/glucanases superfamily | Domain | Interproscan |
| PF00092 all species → | VWA | von Willebrand factor type A domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036465 all species → | Homologous_superfamily | von Willebrand factor A-like domain superfamily | Interproscan |
| IPR013320 all species → | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR002035 all species → | Domain | von Willebrand factor, type A | Interproscan |
| IPR006558 all species → | Domain | LamG-like jellyroll fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47635 all species → | CUB DOMAIN-CONTAINING PROTEIN | Interproscan |
g24352.t1.1. This gene does have a gene model — the search simply returned no hit.g24352.t1.1.
