Gene detail

Detailed information of g2456.t1 in Acropora digitifera

Genomic Location: chr2Alt:99571...130015
NR annotation: XP_015758661.1, PREDICTED: unconventional myosin-Ie-like isoform X1 [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g2456.t1

ATGCCTTCCAACTATCACTGGCAAAGCAAGGGCAATGTTAAGGCAAGCGGGGTGGAAGACATGGTGCTTCTACCGAAGATCCAAGAAGCGTCAATCGTGGAAAACCTTAAGAAGCGTTACATGGACGATCTTATCTTTACATATATTGGTCCTGTATTAATCTCTGTGAACCCATTCAAGCAGATGCCATACTTTACAGAGAAAGAAATTGACATGTACCAGGGAGCTGCATCCTATGAGAACCCTCCTCATATATATGCATTGACTGACAACATGTACAGAAACATGTTAATTGATCAAGAAAACCAATGTGTCATTATCAGTGGTGAAAGTGGAGCAGGGAAGACTGTTTGTGCAAAATTTATCATGAACTATCTTGCTAAAGTGTCTGGTGGAGGTCCAAGTGTACAGAAAATAAAAGATGTCATTCTTGAATCTAATCCTCTACTGGAGGCCTTTGGTAATGCCAAGACAGTCAGGAACAACAATTCCAGCAGATTTGGAAAATATGTCGAAATTCAGTTTACCAAAGGTGGGCAGCCTGATGGTGGCAAAATTTCAAATTTTCTTCTGGAGAAGTCAAGAGTTGTAAGTCAGAATCCATCAGAAAGGAACTTTCATGTATTTTACCAACTTATAATGGGTGCTACTAGTGAAGAGAAAGATACATTAGACATGCTATGGAAGGATTCTGATGGAGAAGATTTGTTTGAAAACTGTGATTTTGATGAAAACTCAGTTGCCAATGAGGATAGTAATGTTGCTACTGGTGTTGAATCTGGTGTTTGTTTGTCTAAAGAGGATGATAAGTTTGATCTTGAAGTTTCTTGTAACAAAAGTGAATCTGATGATGTTGAGGAAGGTGGAAATTACCCAAAAGCAAAAGAGCAAGCAGCCAGCACTTGTGTGGTGGACGGCAAGAGGGTCATGTGGAATACATTATTTTTGAAAACTTTGTTGTGGCTGAGAAGAGAATTTGGTCTGACAGAACCAAGTTATTACTACTACCTGAATCAGAGTGGTACGTACTCAGTTGATGGCACTGATGATGTCAAGGATTATGAAGAAACAAGAAGAGCGATGGATGTGATTGGCATATCAGACTATGACCAAGTCAGTGTGTTGCAAATAGTGGCTGGAGTTCTTCATTTGGGAAACATTTCATTTGTAGAGCAAGGCAACTATGCAGTGCCAAATGATGATGAGTTTTTAGCATATCCTGCTTACCTGTTGGGTGTTAATGACATGTTATTAAAGGAGAAACTGACCAGCCGTGTGATGGATAGCAAATGGGGCGGCAAAACTGAAAGCATCAATATGAAATTAAATGTTGAACAGGCATGTTACACCAGGGATGCATTAGCTAAAGCTCTTTACACCAGAATATTTGACTTTCTTGTCCAGTCAGTGAATAAAGCAATGCAGAAGAATCTTGATGAACTCACAATTGGTGTGCTGGATATCTATGGCTTTGAAATCTTCCAGAAAAATGGATTTGAACAGTTTTGCATTAACTTTGTCAATGAAAAGCTTCAACAGATCTTCATTGAACTTACATTGAAAGCAGAACAGGAAGAGTATGTGGAAGAGGGAATCAATTGGACTCCAATTGATTATTTCAACAACAAAATTGTGTGTGATGTTATAGAAAACAAGAAACCTCCAGGTATAATGTGTGTGTTAGATGACGTTTGTGCAACCATGCACGCAGTCAGTGAAGGAGCTGATTCCACTCTTCTTGAGAAATTAAACAATGCAGTGGGAACTCATCAGCATTTTCAAGGAGGCAGTGGTGGCTTTATTATTCATCACTATGCAGGAAAGGTGACATATGATGTCAATGGATTTTGCGAAAGAAATCGTGATGTGCTCTTCAAAGATCTTATTGAACTCATGCAAACAAGTGAAAACTCTTTCATCAGTCATCTGTTCCCTGAAGATGTTAACACTGAAAAAAGAGGTAGACCCACAACAGCAGGAAACAAAATTAAGACTCAAGCCAACCAACTGGTGGACAGACTTATGAAGTGCACCCCTCATTACATACGCTGCATCAAACCAAATGAAAGCAAGAAGGCACATGACTGGGAAGGAGATAGAGTCAAGCATCAAGTAGAGTACTTAGGACTCAAGGAAAACATCCGCGTGCGAAGAGCAGGGTTTGCCTACAGAAGACCATTTCAGAAATTCCTGGAAAGATATGCTATTCTCACCAAAGAAACCTGGCCGCGATGGGCTGGAGATGTGCGAAGAGGAGTGGAACATCTCATGAGGGCTGTTAATATGGAACCTGACCAGTGGCAAATGGGAAAAACCAAAGTATTCATCAAAGCACCCGAATCTCTCTTCTTACTGGAGGAACTGCGGGATAGAAAATTTGATGGCTATGCCAGAAAGATTCAGAAGGCCTACAGAATGTACAAATCAAGACAGTACTTTGCTGAACTCAAACAACAAGCCTCGGACATCCTTTTCAACAAAAAGGAGAGGCGGCGTGGCAGCATTAACCGAAATTTTGCTGGTGATTACATTGGCTATGATGGTAATCCAGCCCTCAGGAGTTTAGTTGAAAAACGAGAGAGGATTGAATTTGCTGTCACTGTAAACAAATACGACAGGAGATTCAAGGCCATGAAGCGAGACCTTCTTTTATCAAGCAAACACGTCTACCTAATAGGAAGAGAAAAAGTGAAGAAAGGACCAGAGAAGGGCAGAGTTTACGAAGTGGTGAAACGTAAACTTGAAATGAAGAACATTGGATCAGTATCTCTCAGTCCTCAACAAGATGACTTTATAGTTGTTCATATTCCTGGTGATTATGACAGTGTTTTGGAAACTGTGTTCAAAACGGAATTTCTTACGTTATTATCATCGAAGTACCAAGAATCCACGAACCGTCAACTGAAAGTGGACATCACGAGCAGCATTACAGTGGCAGTGAAAAAAGAAGGTTGGGGTGGCGGTGGAACACGCACTCTCAGTTTCACTGCATCTGGAGCTTCGGATTTTCCTCTGTTAAAACCTTCTGGGAAAACACTCAATGTCTCTATTGGTCGAGGTCTCCCAAAGGACACAAGACCCGGTGTAAAAATCTCCAAGTCATCAAGCAAACCTCGTAGAGCTGCACCGGGTGCTCCCAATCAACAGCAGGCGGGAGGTCAGTGGGTACGTCGTGCATCCAGTGTCAGCCGATATGCTGCGACACACAAGCAGCCATCACTACCACGTTCCGGAGCACAGCATTTGGCTCGAACTTCTGCTAATGTCAACATGGCAGATCAAGCATTTATGAGGACGCCTGAGTCTGGAGTATGCGGATTTAACCGCATGAATCCACCAATCTGCACTCGAGGCACTCGAGCTACTTATCCTGTACCCCGCGGCACCGGACGCTATGGACCTGACTCGCAGCAGCATGCCTCATCAATTCAGTTAAGCAATGGAACACAGAAATATCGAAATACAAAACAGCATAACCCTATGGAAAATGAACAGCACAGGAAAACTGAGGGGTCACTCCGGCGTTTGGCTAACCATGGCAGGCGAACAGTAAGTTTTGAAGACGATCATGCAGTTCAAAAGAGGGATAAGACAGTTATGCGACCGCGCTCGGTCAGCAGTGGAAGGTCTTATCAGACATTAGGCAATCAGATTGAGAAGAGTGAGCACGAAACAGTGCGCCGTCCACGCTCTGTGACGTTTGTTTTGCCAAATAAAAATGATATCAGTTTAAAAGAGAATTCAAAGGAAGATTTTAGAAACGGCCTGGTAGGAACACTTGCGAATGAGCGTTACTCCTCAAGACTAGAAAAAATTGCTTACAGTACAACGAGTTCTCAAATGAACCAGACATCTCAAACGAGCTCTCAGAGATCGTTTACCACGCCACAGCACTTGCTAAATGCTGGAGAACAGCGGAGCCGAAACGCTTCTTACCGAGCAGCATTCCACAGTACTACAAACCAGCAGAAAGCGAGGGCTATGCAACAGATTATGAACGGCTACGAGACAATAAATCCTTTGGATTACAGCAGAAACAAAACTCCAACAGCAGATTGTTCAGACTACGTAGCAATGTCGCAGCAGCCTGTTTCTGGTTGTCCGATTCACGGAGAGAGGAAGAGAACACTTAACAGAAAAGGGTGTAACCAGGCGAAATTGGAACAGCGGCACAACGATTATGAAGAAATGAAACCACAAAATATCAACTCTACAGCCTCACGCAGTTTTGCCACATCCCAGCAGAATGTTGAATACATTAATAGCCCTGCTGTCTTTAATGGTGCTTACGGCAATAACGCGAGGATGCCACCTTATAGTACTGCAACAGACCTTGGAGATGGCTCATGCAATTATGCTTCATTCAAGCAAAAGCCCCCAACTCAACAAGGTCAGGCATATGAGAACCTATCAACTGGGCAGAGCGCTCCATACAGCAGTACTTTTGCCACTGAAATGTACGGTCGCACAAACGAATATTGTGACGGCGCATATAGACACCCCACAAGAGGACTGGAAACGACACTTCATTCTTCGGTTACAGCATCCCAGATGATCCCACACTACAACATGGCGGCAACTCGCCAGAATGTCACATGCAGTCATACTACTAGTCAGCAGTATGGGGGATATCATCCGCCAGCAACACCATCCCTGTACGATCCTCCACACAGTACTCTGGCGAACCTTCAAAATGAAAGGCATTCTCTTACGACAAACCAACCGAGTGGATCTCGCCATTCTACAGTCACATCACAACATAGTATCCCTTGCGGTTGGCTGTCAACATCCCAGCAGGGTACACCGTGCAGCTCGTCAGGATTGCAGAAAAACTGCGGAGTGTACCACTCCGCGGTGGTGTCTCAACACAGTGTGCCATATAGCTCTGCAGCAACCCAGCAGGATGAAGTGTACAGCGGCCATGAAAACGGCAACCATCACAATGGAGCATGTTATCCCACATCAACCGTTGACAATGTTTTCAACAAGACAGCGTTCAAACACGACCAAGGTCAAGAGTATGATGCCGCTCAGCACGAAAACGGTTATGATGGTTATGAGAGCAGTGATAGCGATTTTGACGACACTGAGAGTGACGATGATGACGCTCAGAACGGCTATGAGAACTTGAGTCAATGGAATGGTGCGGTGAACGCGTCAATTGATGAGGAGGACACAGGCTATCAACAGCCTGATAGTATCGAGAGGATGAACTCCAAGAAGACGTCGCTTTCAAAGAGGCCTCCTGCCCCAGGGAAACCCAAGGTGAAGCCAAAACCCACCCCAACCCTCCCCCGCTGCAAAACTATTTATCCTTACGACGCAACAGACGTAGACGAATTGAGCTTCGAACCGGATGAGATTATTGAGATAATTAAAGAAGATCCCTCAGGATGGTGGACTGGGAAGCTGCGGGGCCGCGAGGGACTGTTTCCCTGTAATTACATCGAAAAGCTCTAA

Transcript

chr2Alt.g2456.t1

GCTTAGAATGATTTTTCCATTGCCGTTAATACCACATTTCTTTTAATCTCAAGTGCTGACTGGAATAAGCAACAAAATGCCTTCCAACTATCACTGGCAAAGCAAGGGCAATGTTAAGGCAAGCGGGGTGGAAGACATGGTGCTTCTACCGAAGATCCAAGAAGCGTCAATCGTGGAAAACCTTAAGAAGCGTTACATGGACGATCTTATCTTTACATATATTGGTCCTGTATTAATCTCTGTGAACCCATTCAAGCAGATGCCATACTTTACAGAGAAAGAAATTGACATGTACCAGGGAGCTGCATCCTATGAGAACCCTCCTCATATATATGCATTGACTGACAACATGTACAGAAACATGTTAATTGATCAAGAAAACCAATGTGTCATTATCAGTGGTGAAAGTGGAGCAGGGAAGACTGTTTGTGCAAAATTTATCATGAACTATCTTGCTAAAGTGTCTGGTGGAGGTCCAAGTGTACAGAAAATAAAAGATGTCATTCTTGAATCTAATCCTCTACTGGAGGCCTTTGGTAATGCCAAGACAGTCAGGAACAACAATTCCAGCAGATTTGGAAAATATGTCGAAATTCAGTTTACCAAAGGTGGGCAGCCTGATGGTGGCAAAATTTCAAATTTTCTTCTGGAGAAGTCAAGAGTTGTAAGTCAGAATCCATCAGAAAGGAACTTTCATGTATTTTACCAACTTATAATGGGTGCTACTAGTGAAGAGAAAGATACATTAGACATGCTATGGAAGGATTCTGATGGAGAAGATTTGTTTGAAAACTGTGATTTTGATGAAAACTCAGTTGCCAATGAGGATAGTAATGTTGCTACTGGTGTTGAATCTGGTGTTTGTTTGTCTAAAGAGGATGATAAGTTTGATCTTGAAGTTTCTTGTAACAAAAGTGAATCTGATGATGTTGAGGAAGGTGGAAATTACCCAAAAGCAAAAGAGCAAGCAGCCAGCACTTGTGTGGTGGACGGCAAGAGGGTCATGTGGAATACATTATTTTTGAAAACTTTGTTGTGGCTGAGAAGAGAATTTGGTCTGACAGAACCAAGTTATTACTACTACCTGAATCAGAGTGGTACGTACTCAGTTGATGGCACTGATGATGTCAAGGATTATGAAGAAACAAGAAGAGCGATGGATGTGATTGGCATATCAGACTATGACCAAGTCAGTGTGTTGCAAATAGTGGCTGGAGTTCTTCATTTGGGAAACATTTCATTTGTAGAGCAAGGCAACTATGCAGTGCCAAATGATGATGAGTTTTTAGCATATCCTGCTTACCTGTTGGGTGTTAATGACATGTTATTAAAGGAGAAACTGACCAGCCGTGTGATGGATAGCAAATGGGGCGGCAAAACTGAAAGCATCAATATGAAATTAAATGTTGAACAGGCATGTTACACCAGGGATGCATTAGCTAAAGCTCTTTACACCAGAATATTTGACTTTCTTGTCCAGTCAGTGAATAAAGCAATGCAGAAGAATCTTGATGAACTCACAATTGGTGTGCTGGATATCTATGGCTTTGAAATCTTCCAGAAAAATGGATTTGAACAGTTTTGCATTAACTTTGTCAATGAAAAGCTTCAACAGATCTTCATTGAACTTACATTGAAAGCAGAACAGGAAGAGTATGTGGAAGAGGGAATCAATTGGACTCCAATTGATTATTTCAACAACAAAATTGTGTGTGATGTTATAGAAAACAAGAAACCTCCAGGTATAATGTGTGTGTTAGATGACGTTTGTGCAACCATGCACGCAGTCAGTGAAGGAGCTGATTCCACTCTTCTTGAGAAATTAAACAATGCAGTGGGAACTCATCAGCATTTTCAAGGAGGCAGTGGTGGCTTTATTATTCATCACTATGCAGGAAAGGTGACATATGATGTCAATGGATTTTGCGAAAGAAATCGTGATGTGCTCTTCAAAGATCTTATTGAACTCATGCAAACAAGTGAAAACTCTTTCATCAGTCATCTGTTCCCTGAAGATGTTAACACTGAAAAAAGAGGTAGACCCACAACAGCAGGAAACAAAATTAAGACTCAAGCCAACCAACTGGTGGACAGACTTATGAAGTGCACCCCTCATTACATACGCTGCATCAAACCAAATGAAAGCAAGAAGGCACATGACTGGGAAGGAGATAGAGTCAAGCATCAAGTAGAGTACTTAGGACTCAAGGAAAACATCCGCGTGCGAAGAGCAGGGTTTGCCTACAGAAGACCATTTCAGAAATTCCTGGAAAGATATGCTATTCTCACCAAAGAAACCTGGCCGCGATGGGCTGGAGATGTGCGAAGAGGAGTGGAACATCTCATGAGGGCTGTTAATATGGAACCTGACCAGTGGCAAATGGGAAAAACCAAAGTATTCATCAAAGCACCCGAATCTCTCTTCTTACTGGAGGAACTGCGGGATAGAAAATTTGATGGCTATGCCAGAAAGATTCAGAAGGCCTACAGAATGTACAAATCAAGACAGTACTTTGCTGAACTCAAACAACAAGCCTCGGACATCCTTTTCAACAAAAAGGAGAGGCGGCGTGGCAGCATTAACCGAAATTTTGCTGGTGATTACATTGGCTATGATGGTAATCCAGCCCTCAGGAGTTTAGTTGAAAAACGAGAGAGGATTGAATTTGCTGTCACTGTAAACAAATACGACAGGAGATTCAAGGCCATGAAGCGAGACCTTCTTTTATCAAGCAAACACGTCTACCTAATAGGAAGAGAAAAAGTGAAGAAAGGACCAGAGAAGGGCAGAGTTTACGAAGTGGTGAAACGTAAACTTGAAATGAAGAACATTGGATCAGTATCTCTCAGTCCTCAACAAGATGACTTTATAGTTGTTCATATTCCTGGTGATTATGACAGTGTTTTGGAAACTGTGTTCAAAACGGAATTTCTTACGTTATTATCATCGAAGTACCAAGAATCCACGAACCGTCAACTGAAAGTGGACATCACGAGCAGCATTACAGTGGCAGTGAAAAAAGAAGGTTGGGGTGGCGGTGGAACACGCACTCTCAGTTTCACTGCATCTGGAGCTTCGGATTTTCCTCTGTTAAAACCTTCTGGGAAAACACTCAATGTCTCTATTGGTCGAGGTCTCCCAAAGGACACAAGACCCGGTGTAAAAATCTCCAAGTCATCAAGCAAACCTCGTAGAGCTGCACCGGGTGCTCCCAATCAACAGCAGGCGGGAGGTCAGTGGGTACGTCGTGCATCCAGTGTCAGCCGATATGCTGCGACACACAAGCAGCCATCACTACCACGTTCCGGAGCACAGCATTTGGCTCGAACTTCTGCTAATGTCAACATGGCAGATCAAGCATTTATGAGGACGCCTGAGTCTGGAGTATGCGGATTTAACCGCATGAATCCACCAATCTGCACTCGAGGCACTCGAGCTACTTATCCTGTACCCCGCGGCACCGGACGCTATGGACCTGACTCGCAGCAGCATGCCTCATCAATTCAGTTAAGCAATGGAACACAGAAATATCGAAATACAAAACAGCATAACCCTATGGAAAATGAACAGCACAGGAAAACTGAGGGGTCACTCCGGCGTTTGGCTAACCATGGCAGGCGAACAGTAAGTTTTGAAGACGATCATGCAGTTCAAAAGAGGGATAAGACAGTTATGCGACCGCGCTCGGTCAGCAGTGGAAGGTCTTATCAGACATTAGGCAATCAGATTGAGAAGAGTGAGCACGAAACAGTGCGCCGTCCACGCTCTGTGACGTTTGTTTTGCCAAATAAAAATGATATCAGTTTAAAAGAGAATTCAAAGGAAGATTTTAGAAACGGCCTGGTAGGAACACTTGCGAATGAGCGTTACTCCTCAAGACTAGAAAAAATTGCTTACAGTACAACGAGTTCTCAAATGAACCAGACATCTCAAACGAGCTCTCAGAGATCGTTTACCACGCCACAGCACTTGCTAAATGCTGGAGAACAGCGGAGCCGAAACGCTTCTTACCGAGCAGCATTCCACAGTACTACAAACCAGCAGAAAGCGAGGGCTATGCAACAGATTATGAACGGCTACGAGACAATAAATCCTTTGGATTACAGCAGAAACAAAACTCCAACAGCAGATTGTTCAGACTACGTAGCAATGTCGCAGCAGCCTGTTTCTGGTTGTCCGATTCACGGAGAGAGGAAGAGAACACTTAACAGAAAAGGGTGTAACCAGGCGAAATTGGAACAGCGGCACAACGATTATGAAGAAATGAAACCACAAAATATCAACTCTACAGCCTCACGCAGTTTTGCCACATCCCAGCAGAATGTTGAATACATTAATAGCCCTGCTGTCTTTAATGGTGCTTACGGCAATAACGCGAGGATGCCACCTTATAGTACTGCAACAGACCTTGGAGATGGCTCATGCAATTATGCTTCATTCAAGCAAAAGCCCCCAACTCAACAAGGTCAGGCATATGAGAACCTATCAACTGGGCAGAGCGCTCCATACAGCAGTACTTTTGCCACTGAAATGTACGGTCGCACAAACGAATATTGTGACGGCGCATATAGACACCCCACAAGAGGACTGGAAACGACACTTCATTCTTCGGTTACAGCATCCCAGATGATCCCACACTACAACATGGCGGCAACTCGCCAGAATGTCACATGCAGTCATACTACTAGTCAGCAGTATGGGGGATATCATCCGCCAGCAACACCATCCCTGTACGATCCTCCACACAGTACTCTGGCGAACCTTCAAAATGAAAGGCATTCTCTTACGACAAACCAACCGAGTGGATCTCGCCATTCTACAGTCACATCACAACATAGTATCCCTTGCGGTTGGCTGTCAACATCCCAGCAGGGTACACCGTGCAGCTCGTCAGGATTGCAGAAAAACTGCGGAGTGTACCACTCCGCGGTGGTGTCTCAACACAGTGTGCCATATAGCTCTGCAGCAACCCAGCAGGATGAAGTGTACAGCGGCCATGAAAACGGCAACCATCACAATGGAGCATGTTATCCCACATCAACCGTTGACAATGTTTTCAACAAGACAGCGTTCAAACACGACCAAGGTCAAGAGTATGATGCCGCTCAGCACGAAAACGGTTATGATGGTTATGAGAGCAGTGATAGCGATTTTGACGACACTGAGAGTGACGATGATGACGCTCAGAACGGCTATGAGAACTTGAGTCAATGGAATGGTGCGGTGAACGCGTCAATTGATGAGGAGGACACAGGCTATCAACAGCCTGATAGTATCGAGAGGATGAACTCCAAGAAGACGTCGCTTTCAAAGAGGCCTCCTGCCCCAGGGAAACCCAAGGTGAAGCCAAAACCCACCCCAACCCTCCCCCGCTGCAAAACTATTTATCCTTACGACGCAACAGACGTAGACGAATTGAGCTTCGAACCGGATGAGATTATTGAGATAATTAAAGAAGATCCCTCAGGATGGTGGACTGGGAAGCTGCGGGGCCGCGAGGGACTGTTTCCCTGTAATTACATCGAAAAGCTCTAATGAATTGGCATCAGTCAGAATCAAGATGTTATGTTCTGTACTATAGATGTATAAAAATTTCAAGTATCTAAACAGTTTAGTGCACGGATATCGATTAAGTGTGCTTTCAGCAGGCAATCAGGTGTCTTCTGACGGAGTGTAGTTTAAATTTCGTTGTGTGGAACAAAGAAGGGCCTTCAACAGACAACGAGTGAACAAGAACGGTGCTGGCTAAGATATTCTGTCCAATTACAAGGTATTTTGTCAGGATCGAATGGATTACGGAACAACAATTGAGACGTTGTTTTTTGTTTCAAATCTAACATTCTACACAATTGGTTTTGGTCTGAAATAGCTGGGCGGTTCAAAAGACGACGACTTAACATAGCGCGCGTGAGAGTTGTCTTTATTGTTTATCACCAGATAATAAACTAGTTTTCTTTACTTACATTCGATCGTTATCCTTTGTAACCCACATATTTTTTCAATGCCCCTCCACTTGTCCAGCTGCAAAAAATTTCACCCTGATACATATTCATAACAGTGGACTGTTTATTTGGGCTTTGTTGAGGTTGATAAAATGACAGTGAAATAACTCTTTTTAAGTTTTCCATTTAAGCAGATAGACGAAATGTGTGTGAATTAAATTTCTTTCAGTGAAATGACTCTTCAAGTTTTCCATTTAAGCAGATTACATTCATGGACGAAATGTGTCTGAATTAAATTTTTTTCTGTTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E9Q634	Unconventional myosin-Ie OS=Mus musculus OX=10090 GN=Myo1e PE=1 SV=1
Q12965	Unconventional myosin-Ie OS=Homo sapiens OX=9606 GN=MYO1E PE=1 SV=2
Q63356	Unconventional myosin-Ie OS=Rattus norvegicus OX=10116 GN=Myo1e PE=1 SV=1

Gene family

Family type	Membership / link
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00063 all species →	Myosin_head	Myosin head (motor domain)	Domain	Interproscan
PF14604 all species →	SH3_9	Variant SH3 domain	Domain	Interproscan
PF06017 all species →	Myosin_TH1	Unconventional myosin tail, actin- and lipid-binding	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010926 all species →	Domain	Class I myosin tail homology domain	Interproscan
IPR001609 all species →	Domain	Myosin head, motor domain	Interproscan
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR035507 all species →	Domain	Unconventional myosin-Ie/If, SH3 domain	Interproscan
IPR036072 all species →	Domain	Class I myosin, motor domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13140 all species →	MYOSIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003774 all species →	Molecular Function	cytoskeletal motor activity	Interproscan
GO:0016459 all species →	Cellular Component	myosin complex	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0000146 all species →	Molecular Function	microfilament motor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007015 all species →	Biological Process	actin filament organization	Interproscan
GO:0015629 all species →	Cellular Component	actin cytoskeleton	Interproscan
GO:0030050 all species →	Biological Process	vesicle transport along actin filament	Interproscan
GO:0031982 all species →	Cellular Component	vesicle	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10356	MYO1; myosin I	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of g2456.t1 across 39 RNA-seq samples of Acropora digitifera. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

39Samples

39TPM > 0

1Conditions

113.9Max TPM

81.6Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
Coral branch	39	39	81.57	113.86

Per sample · hover a bar for the full sample record

Show the sample table (39 samples)

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR23047243	Coral branch	Coral branch	adult	not recorded	SRP416931	113.86
SRR23047220	Coral branch	Coral branch	adult	not recorded	SRP416931	110.50
SRR23047222	Coral branch	Coral branch	adult	not recorded	SRP416931	106.58
SRR23047227	Coral branch	Coral branch	adult	not recorded	SRP416931	106.05
SRR23047234	Coral branch	Coral branch	adult	not recorded	SRP416931	96.54
SRR23047208	Coral branch	Coral branch	adult	not recorded	SRP416931	91.90
SRR23047240	Coral branch	Coral branch	adult	not recorded	SRP416931	90.54
SRR23047210	Coral branch	Coral branch	adult	not recorded	SRP416931	88.20
SRR23047206	Coral branch	Coral branch	adult	not recorded	SRP416931	87.18
SRR23047207	Coral branch	Coral branch	adult	not recorded	SRP416931	85.38
SRR23047221	Coral branch	Coral branch	adult	not recorded	SRP416931	85.36
SRR23047209	Coral branch	Coral branch	adult	not recorded	SRP416931	84.93
SRR23047241	Coral branch	Coral branch	adult	not recorded	SRP416931	84.68
SRR23047214	Coral branch	Coral branch	adult	not recorded	SRP416931	83.29
SRR23047232	Coral branch	Coral branch	adult	not recorded	SRP416931	83.05
SRR23047226	Coral branch	Coral branch	adult	not recorded	SRP416931	81.54
SRR23047225	Coral branch	Coral branch	adult	not recorded	SRP416931	81.38
SRR23047242	Coral branch	Coral branch	adult	not recorded	SRP416931	80.76
SRR23047223	Coral branch	Coral branch	adult	not recorded	SRP416931	80.35
SRR23047219	Coral branch	Coral branch	adult	not recorded	SRP416931	79.61
SRR23047216	Coral branch	Coral branch	adult	not recorded	SRP416931	78.31
SRR23047230	Coral branch	Coral branch	adult	not recorded	SRP416931	77.02
SRR23047244	Coral branch	Coral branch	adult	not recorded	SRP416931	76.99
SRR23047224	Coral branch	Coral branch	adult	not recorded	SRP416931	76.65
SRR23047237	Coral branch	Coral branch	adult	not recorded	SRP416931	76.30
SRR23047213	Coral branch	Coral branch	adult	not recorded	SRP416931	75.95
SRR23047239	Coral branch	Coral branch	adult	not recorded	SRP416931	75.83
SRR23047231	Coral branch	Coral branch	adult	not recorded	SRP416931	75.74
SRR23047238	Coral branch	Coral branch	adult	not recorded	SRP416931	75.72
SRR23047217	Coral branch	Coral branch	adult	not recorded	SRP416931	75.16
SRR23047228	Coral branch	Coral branch	adult	not recorded	SRP416931	75.01
SRR23047229	Coral branch	Coral branch	adult	not recorded	SRP416931	73.30
SRR23047235	Coral branch	Coral branch	adult	not recorded	SRP416931	71.53
SRR23047233	Coral branch	Coral branch	adult	not recorded	SRP416931	70.67
SRR23047236	Coral branch	Coral branch	adult	not recorded	SRP416931	68.50
SRR23047215	Coral branch	Coral branch	adult	not recorded	SRP416931	67.83
SRR23047212	Coral branch	Coral branch	adult	not recorded	SRP416931	66.73
SRR23047211	Coral branch	Coral branch	adult	not recorded	SRP416931	66.07
SRR23047218	Coral branch	Coral branch	adult	not recorded	SRP416931	56.23

Source: CnidoSite RNA-seq expression matrices (ADIGI_TPM, StringTie quantification over 39 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

Co-expression network

Genes whose expression across the transcriptome samples of Acropora digitifera tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.

Direction	Partners	Most correlated partner	PCC
Positively correlated	31	g19257.t1	0.847502260677365
Negatively correlated	11	g26909.t1	-0.80550926177003

Open this gene in Network Analysis → The network opens with the gene already entered and both directions selected. There you can add up to 9 more genes, switch between the positive and negative network, and export the edge list.

Single-cell expression

Whether this gene can be visualised in the single-cell atlases of Acropora digitifera, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.

No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.

Epigenetic marks

Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.

Peak calls overlapping this gene

Assay	Sample	Peaks	Region

No called peak overlaps this gene in 1 available assay. Either the gene is not near an accessible or marked region in those samples, or it is not represented in the peak caller’s annotation.

Browse the full epigenomic landscape of this species: DNase-seq (DHS).

What you can do with this gene

Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.

Analysis	What it does	Status
Primer design	Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed.	template found	open →
BLAST	Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start.	template found	open →
Expression heatmap	Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it.	ready	open →
Gene family / orthogroup	Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue.		open →
Gene set analysis	Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it.		open →