Detailed information of g247.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MCB0193468.1, aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Anaerolineae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B2DEV5Alpha-methylserine aldolase OS=Ralstonia sp. OX=54061 GN=msald PE=1 SV=1
B2DEV9Alpha-methylserine aldolase OS=Variovorax paradoxus OX=34073 GN=msald PE=1 SV=1
B2DEW1Alpha-methylserine aldolase OS=Variovorax paradoxus OX=34073 GN=msald PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00082Peptidase_S8Subtilase familyDomainInterproscan
PF01483P_proproteinProprotein convertase P-domainFamilyInterproscan
PF16470S8_pro-domainPeptidase S8 pro-domainDomainInterproscan
PF08245Mur_ligase_MMur ligase middle domainDomainInterproscan
PF02127Peptidase_M18Aminopeptidase I zinc metalloprotease (M18)FamilyInterproscan
PF00464SHMTSerine hydroxymethyltransferaseDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF03721UDPG_MGDP_dh_NUDP-glucose/GDP-mannose dehydrogenase family, NAD binding domainDomainInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF01699Na_Ca_exSodium/calcium exchanger proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023827Active_sitePeptidase S8, subtilisin, Asp-active siteInterproscan
IPR036852Homologous_superfamilyPeptidase S8/S53 domain superfamilyInterproscan
IPR022398Active_sitePeptidase S8, subtilisin, His-active siteInterproscan
IPR000209DomainPeptidase S8/S53 domainInterproscan
IPR002884DomainP domainInterproscan
IPR015500FamilyPeptidase S8, subtilisin-relatedInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR032815DomainPeptidase S8, pro-domainInterproscan
IPR034182DomainKexin/furin catalytic domainInterproscan
IPR023828Active_sitePeptidase S8, subtilisin, Ser-active siteInterproscan
IPR038466Homologous_superfamilyPeptidase S8, pro-domain superfamilyInterproscan
IPR018109Conserved_siteFolylpolyglutamate synthetase, conserved siteInterproscan
IPR036615Homologous_superfamilyMur ligase, C-terminal domain superfamilyInterproscan
IPR036565Homologous_superfamilyMur-like, catalytic domain superfamilyInterproscan
IPR001645FamilyFolylpolyglutamate synthetaseInterproscan
IPR013221DomainMur ligase, centralInterproscan
IPR001948FamilyPeptidase M18Interproscan
IPR001085FamilySerine hydroxymethyltransferaseInterproscan
IPR039429DomainSerine hydroxymethyltransferase-like domainInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR049943FamilySerine hydroxymethyltransferase-likeInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR051022FamilyNotch Signaling and Cell Fate DeterminationInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR028356FamilyUDP-glucose 6-dehydrogenase, eukaryotic typeInterproscan
IPR001732DomainUDP-glucose/GDP-mannose dehydrogenase, N-terminalInterproscan
IPR000164FamilyHistone H3/CENP-AInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR004481FamilySodium/potassium/calcium exchangerInterproscan
IPR004837DomainSodium/calcium exchanger membrane regionInterproscan
IPR044880Homologous_superfamilyNCX, central ion-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42884PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATEDInterproscan
PTHR11136FOLYLPOLYGLUTAMATE SYNTHASE-RELATEDInterproscan
PTHR28570ASPARTYL AMINOPEPTIDASEInterproscan
PTHR11680SERINE HYDROXYMETHYLTRANSFERASEInterproscan
PTHR24049CRUMBS FAMILY MEMBERInterproscan
PTHR22906PROPERDINInterproscan
PTHR11374UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASEInterproscan
PTHR11426HISTONE H3Interproscan
PTHR33327ENDONUCLEASEInterproscan
PTHR10846SODIUM/POTASSIUM/CALCIUM EXCHANGERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008236Molecular Functionserine-type peptidase activityInterproscan
GO:0005802Cellular Componenttrans-Golgi networkInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016485Biological Processprotein processingInterproscan
GO:0030173Cellular Componentobsolete integral component of Golgi membraneInterproscan
GO:0004326Molecular Functiontetrahydrofolylpolyglutamate synthase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0009396Biological Processfolic acid-containing compound biosynthetic processInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0016881Molecular Functionacid-amino acid ligase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008841Molecular Functiondihydrofolate synthase activityInterproscan
GO:0004177Molecular Functionaminopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004372Molecular Functionglycine hydroxymethyltransferase activityInterproscan
GO:0019264Biological Processglycine biosynthetic process from serineInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0035999Biological Processtetrahydrofolate interconversionInterproscan
GO:0006565Biological ProcessL-serine catabolic processInterproscan
GO:0006730Biological Processone-carbon metabolic processInterproscan
GO:0046653Biological Processtetrahydrofolate metabolic processInterproscan
GO:0046655Biological Processfolic acid metabolic processInterproscan
GO:0050897Molecular Functioncobalt ion bindingInterproscan
GO:0070905Molecular Functionserine bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007157Biological Processheterophilic cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0032991Cellular Componentprotein-containing complexInterproscan
GO:0045197Biological Processestablishment or maintenance of epithelial cell apical/basal polarityInterproscan
GO:0003979Molecular FunctionUDP-glucose 6-dehydrogenase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006024Biological Processglycosaminoglycan biosynthetic processInterproscan
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006874Biological Processintracellular calcium ion homeostasisInterproscan
GO:0008273Molecular Functioncalcium, potassium:sodium antiporter activityInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11253H3; histone H3-Antifolate resistanceko01523deepkoala
Folate biosynthesisko00790deepkoala
Exosomeko04147deepkoala

TOP