Detailed information of g248.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_242179154.1, alpha/beta fold hydrolase [Polaribacter marinus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O07081Uncharacterized isochorismatase family protein YrdC OS=Bacillus subtilis (strain 168) OX=224308 GN=yrdC PE=3 SV=1
Q9NUJ1Palmitoyl-protein thioesterase ABHD10, mitochondrial OS=Homo sapiens OX=9606 GN=ABHD10 PE=1 SV=1
Q5E9H9Palmitoyl-protein thioesterase ABHD10, mitochondrial OS=Bos taurus OX=9913 GN=ABHD10 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF15511CENP-T_CCentromere kinetochore component CENP-T histone foldDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF17654Trnau1apSelenocysteine tRNA 1 associated proteins FamilyInterproscan
PF00857IsochorismataseIsochorismatase familyFamilyInterproscan
PF12146Hydrolase_4Serine aminopeptidase, S33FamilyInterproscan
PF08487VITVault protein inter-alpha-trypsin domainFamilyInterproscan
PF13768VWA_3von Willebrand factor type A domainDomainInterproscan
PF00644PARPPoly(ADP-ribose) polymerase catalytic domainFamilyInterproscan
PF04055Radical_SAMRadical SAM superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029600FamilyIntraflagellar transport protein 81Interproscan
IPR039604FamilyNuclear segregation protein Bfr1Interproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR001951FamilyHistone H4Interproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR004823DomainTATA box binding protein associated factor (TAF), histone-like fold domainInterproscan
IPR035425DomainCENP-T/Histone H4, histone foldInterproscan
IPR019809Conserved_siteHistone H4, conserved siteInterproscan
IPR039938FamilyTranscription factor Sp4-likeInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR041085DomaintRNA selenocysteine 1-associated protein 1, C-terminalInterproscan
IPR040434FamilytRNA selenocysteine 1-associated protein 1Interproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR050272FamilyIsochorismatase-like hydrolaseInterproscan
IPR036380Homologous_superfamilyIsochorismatase-like superfamilyInterproscan
IPR000868DomainIsochorismatase-likeInterproscan
IPR022742DomainSerine aminopeptidase, S33Interproscan
IPR013694DomainVIT domainInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR031273FamilyProtein mono-ADP-ribosyltransferase PARP4Interproscan
IPR004102DomainPoly(ADP-ribose) polymerase, regulatory domainInterproscan
IPR036616Homologous_superfamilyPoly(ADP-ribose) polymerase, regulatory domain superfamilyInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR012317DomainPoly(ADP-ribose) polymerase, catalytic domainInterproscan
IPR001357DomainBRCT domainInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR041938Homologous_superfamilyHistone-lysine N-methyltransferase, N-terminal domainInterproscan
IPR039977FamilyHistone-lysine N-methyltransferase Suv4-20/Set9Interproscan
IPR007197DomainRadical SAMInterproscan
IPR034505FamilyAnaerobic coproporphyrinogen-III oxidaseInterproscan
IPR004558FamilyOxygen-independent coproporphyrinogen III oxidase HemNInterproscan
IPR023404Homologous_superfamilyRadical SAM, alpha/beta horseshoeInterproscan
IPR006638DomainElp3/MiaA/NifB-like, radical SAM core domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15614INTRAFLAGELLAR TRANSPORT PROTEIN 81 HOMOLOGInterproscan
PTHR31027NUCLEAR SEGREGATION PROTEIN BFR1Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR10484HISTONE H4Interproscan
PTHR14947ZINC FINGER PROTEINInterproscan
PTHR37457TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATEDInterproscan
PTHR43540PEROXYUREIDOACRYLATE/UREIDOACRYLATE AMIDOHYDROLASE-RELATEDInterproscan
PTHR46530PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4Interproscan
PTHR12977SUPPRESSOR OF VARIEGATION 4-20-RELATEDInterproscan
PTHR13932COPROPORPHYRINIGEN III OXIDASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:0015631Molecular Functiontubulin bindingInterproscan
GO:0030992Cellular Componentintraciliary transport particle BInterproscan
GO:0042073Biological Processintraciliary transportInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0008298Biological Processintracellular mRNA localizationInterproscan
GO:0042175Cellular Componentnuclear outer membrane-endoplasmic reticulum membrane networkInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0001514Biological Processselenocysteine incorporationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003950Molecular FunctionNAD+-protein poly-ADP-ribosyltransferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0140289Biological Processobsolete protein mono-ADP-ribosylationInterproscan
GO:0042799Molecular Functionhistone H4K20 methyltransferase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0006779Biological Processporphyrin-containing compound biosynthetic processInterproscan
GO:0006782Biological Processprotoporphyrinogen IX biosynthetic processInterproscan
GO:0051539Molecular Function4 iron, 4 sulfur cluster bindingInterproscan
GO:0051989Molecular Functioncoproporphyrinogen dehydrogenase activityInterproscan
GO:0004109Molecular Functioncoproporphyrinogen oxidase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11254H4; histone H4-Transfer RNA biogenesisko03016deepkoala
Ubiquitin systemko04121deepkoala
Chromosome and associated proteinsko03036deepkoala

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