Detailed information of g249.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MPZ11048.1, ATP-binding cassette domain-containing protein [Kiloniellaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9I6T2Spermidine/putrescine import ATP-binding protein PotA 1 OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=potA1 PE=3 SV=1
Q160M2Spermidine/putrescine import ATP-binding protein PotA OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) OX=375451 GN=potA PE=3 SV=1
A1UG51Spermidine/putrescine import ATP-binding protein PotA OS=Mycobacterium sp. (strain KMS) OX=189918 GN=potA PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF14945LLC1Normal lung function maintenance, Low in Lung Cancer 1 proteinFamilyInterproscan
PF05653Mg_trans_NIPAMagnesium transporter NIPAFamilyInterproscan
PF02556SecBPreprotein translocase subunit SecBFamilyInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF15249GLTSCR1Conserved region of unknown function on GLTSCR proteinFamilyInterproscan
PF00005ABC_tranABC transporterDomainInterproscan
PF08402TOBE_2TOBE domainFamilyInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR020339FamilyCiliary microtubule inner protein 1-likeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR008521FamilyMagnesium transporter NIPAInterproscan
IPR003708FamilyBacterial protein export chaperone SecBInterproscan
IPR035958Homologous_superfamilySecB-like superfamilyInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR000558FamilyHistone H2BInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR052438FamilyChromatin-remodeling and transcription coactivatorInterproscan
IPR015671DomainGLTSCR protein, conserved domainInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR013611DomainTransport-associated OB, type 2Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050093FamilyABC Transporter, Small Molecule ImporterInterproscan
IPR008995Homologous_superfamilyMolybdate/tungstate binding, C-terminalInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR000477DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19845KATANIN P80 SUBUNITInterproscan
PTHR12570UNCHARACTERIZEDInterproscan
PTHR36918-Interproscan
PTHR23428HISTONE H2BInterproscan
PTHR15572GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1Interproscan
PTHR42781SPERMIDINE/PUTRESCINE IMPORT ATP-BINDING PROTEIN POTAInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007019Biological Processmicrotubule depolymerizationInterproscan
GO:0008352Cellular Componentkatanin complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0015095Molecular Functionmagnesium ion transmembrane transporter activityInterproscan
GO:0015693Biological Processmagnesium ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0015031Biological Processprotein transportInterproscan
GO:0051082Molecular Functionunfolded protein bindingInterproscan
GO:0051262Biological Processprotein tetramerizationInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0016514Cellular ComponentSWI/SNF complexInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0043190Cellular ComponentATP-binding cassette (ABC) transporter complexInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03071secB; preprotein translocase subunit SecB-Transportersko02000deepkoala
Secretion systemko02044deepkoala

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