Detailed information of g25.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_127767805.1, TIGR00282 family metallophosphoesterase [Hwanghaeella grinnelliae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9RUV0Phosphatase/phosphodiesterase DR_1281 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1) OX=243230 GN=DR_1281 PE=1 SV=1
Q9BUZ4TNF receptor-associated factor 4 OS=Homo sapiens OX=9606 GN=TRAF4 PE=1 SV=1
Q61382TNF receptor-associated factor 4 OS=Mus musculus OX=10090 GN=Traf4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF21056ZSWIM1-3_RNaseH-likeZinc finger SWIM domain-containing protein 1/3, RNaseH-like domainDomainInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF07721TPR_4Tetratricopeptide repeatRepeatInterproscan
PF13432TPR_16Tetratricopeptide repeatRepeatInterproscan
PF00515TPR_1Tetratricopeptide repeatRepeatInterproscan
PF13428TPR_14Tetratricopeptide repeatRepeatInterproscan
PF21355TRAF-mep_MATHTRAF/meprin, MATH domainDomainInterproscan
PF018125-FTHF_cyc-lig5-formyltetrahydrofolate cyclo-ligase familyFamilyInterproscan
PF13277YmdBYmdB-like proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001506DomainPeptidase M12AInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR048324DomainZSWIM1/3, RNaseH-like domainInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR011717RepeatTetratricopeptide TPR-4Interproscan
IPR049342DomainTRAF1-6/MEP1A/B-like, MATH domainInterproscan
IPR002083DomainMATH/TRAF domainInterproscan
IPR008974Homologous_superfamilyTRAF-likeInterproscan
IPR005235FamilyMetallophosphoesterase, YmdB-likeInterproscan
IPR029052Homologous_superfamilyMetallo-dependent phosphatase-likeInterproscan
IPR002698Family5-formyltetrahydrofolate cyclo-ligaseInterproscan
IPR037171Homologous_superfamilyNagB/RpiA transferase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan
PTHR47456PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR44117INTRAFLAGELLAR TRANSPORT PROTEIN 88 HOMOLOGInterproscan
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan
PTHR363032',3'-CYCLIC-NUCLEOTIDE 2'-PHOSPHODIESTERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0042802Molecular Functionidentical protein bindingInterproscan
GO:0005814Cellular ComponentcentrioleInterproscan
GO:0019894Molecular Functionkinesin bindingInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0042073Biological Processintraciliary transportInterproscan
GO:0097546Cellular Componentciliary baseInterproscan
GO:0097730Cellular Componentnon-motile ciliumInterproscan
GO:1905515Biological Processnon-motile cilium assemblyInterproscan
GO:0004113Molecular Function2',3'-cyclic-nucleotide 3'-phosphodiesterase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16474IFT88; intraflagellar transport protein 88-Pyrimidine metabolismko00240deepkoala
Small cell lung cancerko05222deepkoala
Cilium and associated proteinsko03037deepkoala

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