Detailed information of g251.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MCK5896813.1, ABC transporter substrate-binding protein [Cocleimonas sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6BMY0Protein SYM1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=SYM1 PE=3 SV=1
Q3SVB0Ornithine carbamoyltransferase OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=argF PE=3 SV=1
Q1QQG6Ornithine carbamoyltransferase OS=Nitrobacter hamburgensis (strain DSM 10229 / NCIMB 13809 / X14) OX=323097 GN=argF PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF16558AZULAmino-terminal Zinc-binding domain of ubiquitin ligase E3ADomainInterproscan
PF09084NMT1NMT1/THI5 likeFamilyInterproscan
PF02729OTCace_NAspartate/ornithine carbamoyltransferase, carbamoyl-P binding domainDomainInterproscan
PF00185OTCaceAspartate/ornithine carbamoyltransferase, Asp/Orn binding domainDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF07722Peptidase_C26Peptidase C26DomainInterproscan
PF00085ThioredoxinThioredoxinDomainInterproscan
PF07749ERp29Endoplasmic reticulum protein ERp29, C-terminal domainDomainInterproscan
PF03803ScramblaseScramblase DomainInterproscan
PF04117Mpv17_PMP22Mpv17 / PMP22 family FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036282Homologous_superfamilyGlutathione S-transferase, C-terminal domain superfamilyInterproscan
IPR000569DomainHECT domainInterproscan
IPR032353DomainUbiquitin-protein ligase E3A, N-terminal zinc-binding domainInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR042556Homologous_superfamilyUbiquitin-protein ligase E3A, N-terminal zinc-binding domain superfamilyInterproscan
IPR044611FamilyUbiquitin-protein ligase E3A/B/C-likeInterproscan
IPR015168DomainSsuA/THI5-likeInterproscan
IPR036901Homologous_superfamilyAspartate/ornithine carbamoyltransferase superfamilyInterproscan
IPR002292FamilyOrnithine/putrescine carbamoyltransferaseInterproscan
IPR006132DomainAspartate/ornithine carbamoyltransferase, carbamoyl-P bindingInterproscan
IPR006130FamilyAspartate/ornithine carbamoyltransferaseInterproscan
IPR006131DomainAspartate/ornithine carbamoyltransferase, Asp/Orn-binding domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR015527FamilyPeptidase C26, gamma-glutamyl hydrolaseInterproscan
IPR029062Homologous_superfamilyClass I glutamine amidotransferase-likeInterproscan
IPR011697FamilyPeptidase C26Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR005788DomainProtein disulfide-isomerase, thioredoxin-like domainInterproscan
IPR013766DomainThioredoxin domainInterproscan
IPR036356Homologous_superfamilyEndoplasmic reticulum resident protein 29, C-terminal domain superfamilyInterproscan
IPR011679DomainEndoplasmic reticulum resident protein 29, C-terminalInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR051063FamilyProtein Disulfide IsomeraseInterproscan
IPR017937Conserved_siteThioredoxin, conserved siteInterproscan
IPR005552FamilyScramblaseInterproscan
IPR007248FamilyMpv17/PMP22Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45700UBIQUITIN-PROTEIN LIGASE E3CInterproscan
PTHR30024ALIPHATIC SULFONATES-BINDING PROTEIN-RELATEDInterproscan
PTHR45753ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIALInterproscan
PTHR47481-Interproscan
PTHR11315PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASEInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR45672PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATEDInterproscan
PTHR23248PHOSPHOLIPID SCRAMBLASE-RELATEDInterproscan
PTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0042918Biological Processalkanesulfonate transmembrane transportInterproscan
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0016597Molecular Functionamino acid bindingInterproscan
GO:0016743Molecular Functioncarboxyl- or carbamoyltransferase activityInterproscan
GO:0004585Molecular Functionornithine carbamoyltransferase activityInterproscan
GO:0019240Biological Processcitrulline biosynthetic processInterproscan
GO:0042450Biological Processarginine biosynthetic process via ornithineInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0008242Molecular Functionomega peptidase activityInterproscan
GO:0005773Cellular ComponentvacuoleInterproscan
GO:0034722Molecular Functiongamma-glutamyl-peptidase activityInterproscan
GO:0046900Biological Processtetrahydrofolylpolyglutamate metabolic processInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003756Molecular Functionprotein disulfide isomerase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0017121Biological Processplasma membrane phospholipid scramblingInterproscan
GO:0017128Molecular Functionphospholipid scramblase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0034614Biological Processcellular response to reactive oxygen speciesInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01307GGH; gamma-glutamyl hydrolaseEC:3.4.19.9
Transportersko02000deepkoala
Arginine biosynthesisko00220deepkoala
Membrane traffickingko04131deepkoala
Peptidases and inhibitorsko01002deepkoala

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