Detailed information of g252.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MCK5810338.1, ABC transporter ATP-binding protein [Cocleimonas sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q28K97Taurine import ATP-binding protein TauB OS=Jannaschia sp. (strain CCS1) OX=290400 GN=tauB PE=3 SV=1
Q16BJ3Taurine import ATP-binding protein TauB OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) OX=375451 GN=tauB PE=3 SV=1
Q4FMG5Taurine import ATP-binding protein TauB OS=Pelagibacter ubique (strain HTCC1062) OX=335992 GN=tauB PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01529DHHCDHHC palmitoyltransferaseFamilyInterproscan
PF21299ADAM10_Cys-richADAM10, cysteine-rich domainDomainInterproscan
PF13574Reprolysin_2Metallo-peptidase family M12B Reprolysin-likeDomainInterproscan
PF02732ERCC4ERCC4 domainDomainInterproscan
PF03798TRAM_LAG1_CLN8TLC domainDomainInterproscan
PF01926MMR_HSR150S ribosome-binding GTPaseFamilyInterproscan
PF12631MnmE_helicalMnmE helical domainFamilyInterproscan
PF02615Ldh_2Malate/L-lactate dehydrogenaseFamilyInterproscan
PF02460PatchedPatched familyFamilyInterproscan
PF00005ABC_tranABC transporterDomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001594DomainPalmitoyltransferase, DHHC domainInterproscan
IPR001762DomainDisintegrin domainInterproscan
IPR001590DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR051489FamilyDisintegrin and Metalloproteinase Domain-ContainingInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR049038DomainADAM10, cysteine-rich domainInterproscan
IPR036436Homologous_superfamilyDisintegrin domain superfamilyInterproscan
IPR047416DomainMUS81, XPF-like nuclease domainInterproscan
IPR006166DomainERCC4 domainInterproscan
IPR033309FamilyCrossover junction endonuclease Mus81Interproscan
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR006634DomainTRAM/LAG1/CLN8 homology domainInterproscan
IPR016439FamilySphingosine N-acyltransferase Lag1/Lac1-likeInterproscan
IPR027368Homologous_superfamilytRNA modification GTPase MnmE domain 2Interproscan
IPR006073DomainGTP binding domainInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR031168DomainTrmE-type guanine nucleotide-binding domainInterproscan
IPR025867DomainMnmE, helical domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043143Homologous_superfamilyMalate/L-sulfolactate/L-lactate dehydrogenase-like, NADPH binding domainInterproscan
IPR036111Homologous_superfamilyMalate/L-sulfolactate/L-lactate dehydrogenase-like superfamilyInterproscan
IPR003767FamilyMalate/L-lactate dehydrogenase-likeInterproscan
IPR043144Homologous_superfamilyMalate/L-sulfolactate/L-lactate dehydrogenase-like, alpha-helical domainInterproscan
IPR003392FamilyProtein patched/dispatchedInterproscan
IPR000731DomainSterol-sensing domainInterproscan
IPR051697FamilyPatched domain-containing proteinInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR050166FamilyABC transporter ATP-binding proteinInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR024862FamilyTransient receptor potential cation channel subfamily VInterproscan
IPR005821DomainIon transport domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12246PALMITOYLTRANSFERASE ZDHHC16Interproscan
PTHR45702ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBERInterproscan
PTHR13451CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81Interproscan
PTHR12560LONGEVITY ASSURANCE FACTOR 1 LAG1Interproscan
PTHR42714TRNA MODIFICATION GTPASE GTPBP3Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR11091OXIDOREDUCTASE-RELATEDInterproscan
PTHR10796PATCHED-RELATEDInterproscan
PTHR42788TAURINE IMPORT ATP-BINDING PROTEIN-RELATEDInterproscan
PTHR23507ZGC:174356Interproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10582TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016409Molecular Functionpalmitoyltransferase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006509Biological Processmembrane protein ectodomain proteolysisInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004518Molecular Functionnuclease activityInterproscan
GO:0000712Biological Processresolution of meiotic recombination intermediatesInterproscan
GO:0000727Biological Processdouble-strand break repair via break-induced replicationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0006308Biological ProcessDNA catabolic processInterproscan
GO:0008821Molecular Functioncrossover junction DNA endonuclease activityInterproscan
GO:0031573Biological Processmitotic intra-S DNA damage checkpoint signalingInterproscan
GO:0048257Molecular Function3'-flap endonuclease activityInterproscan
GO:0048476Cellular ComponentHolliday junction resolvase complexInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0046513Biological Processceramide biosynthetic processInterproscan
GO:0050291Molecular Functionsphingosine N-acyltransferase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0002098Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24682PTCHD; patched domain-containing protein-Transportersko02000deepkoala
Transfer RNA biogenesisko03016deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala

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