Detailed information of g25355.t1 in Acropora digitifera

Genomic Location: chr12Alt:4661408...4668183
NR annotation: XP_029193613.2, neuropilin-2-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P14780Matrix metalloproteinase-9 OS=Homo sapiens OX=9606 GN=MMP9 PE=1 SV=3
P50282Matrix metalloproteinase-9 OS=Rattus norvegicus OX=10116 GN=Mmp9 PE=2 SV=1
P3343672 kDa type IV collagenase OS=Rattus norvegicus OX=10116 GN=Mmp2 PE=1 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00594
all species →		GlaVitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domainDomainInterproscan
PF00754
all species →		F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00040
all species →		fn2Fibronectin type II domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000562
all species →		DomainFibronectin type II domainInterproscan
IPR017857
all species →		Homologous_superfamilyCoagulation factor-like, Gla domain superfamilyInterproscan
IPR000294
all species →		DomainGamma-carboxyglutamic acid-rich (GLA) domainInterproscan
IPR036943
all species →		Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR000421
all species →		DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR035972
all species →		Homologous_superfamilyGamma-carboxyglutamic acid-rich (GLA) domain superfamilyInterproscan
IPR013806
all species →		Homologous_superfamilyKringle-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24543
all species →		MULTICOPPER OXIDASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g25355.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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