Detailed information of g255.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: MBT4527574.1, flagellar biosynthesis protein FlhA [Deltaproteobacteria bacterium]
Species Calvadosia cruxmelitensis · all data for this species · gene families

 Sequence
Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P35620Flagellar biosynthesis protein FlhA OS=Bacillus subtilis (strain 168) OX=224308 GN=flhA PE=1 SV=2
Q56887Flagellar biosynthesis protein FlhA OS=Yersinia enterocolitica OX=630 GN=flhA PE=3 SV=1
P40729Flagellar biosynthesis protein FlhA OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=flhA PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004112 (this species only)
Orthogroup (gene family)OG0006686 (this species only)
Orthogroup (gene family)OG0007451 (this species only)
Orthogroup (gene family)OG0008731 (this species only)
Orthogroup (gene family)OG0019761 (this species only)
Orthogroup (gene family)OG0024471 (this species only)
Orthogroup (gene family)OG0024476 (this species only)
Orthogroup (gene family)OG0024478 (this species only)
Orthogroup (gene family)OG0025839 (this species only)
Orthogroup (gene family)OG0041260 (this species only)
Orthogroup (gene family)OG0041268 (this species only)
Orthogroup (gene family)OG0059847 (this species only)
Orthogroup (gene family)OG0172283 (this species only)
Orthogroup (gene family)OG0172813 (this species only)
Orthogroup (gene family)OG0173057 (this species only)
Transcription factor familyTHAP · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05485
all species →
THAPTHAP domainDomainInterproscan
PF01379
all species →
Porphobil_deamPorphobilinogen deaminase, dipyromethane cofactor binding domainDomainInterproscan
PF03900
all species →
Porphobil_deamCPorphobilinogen deaminase, C-terminal domainDomainInterproscan
PF00412
all species →
LIMLIM domainDomainInterproscan
PF03997
all species →
VPS28VPS28 proteinFamilyInterproscan
PF00771
all species →
FHIPEPFHIPEP familyFamilyInterproscan
PF13517
all species →
FG-GAP_3FG-GAP-like repeatRepeatInterproscan
PF00561
all species →
Abhydrolase_1alpha/beta hydrolase foldDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001849
all species →
DomainPleckstrin homology domainInterproscan
IPR006612
all species →
DomainTHAP-type zinc fingerInterproscan
IPR000860
all species →
FamilyPorphobilinogen deaminaseInterproscan
IPR022417
all species →
DomainPorphobilinogen deaminase, N-terminalInterproscan
IPR022418
all species →
DomainPorphobilinogen deaminase, C-terminalInterproscan
IPR036803
all species →
Homologous_superfamilyPorphobilinogen deaminase, C-terminal domain superfamilyInterproscan
IPR001781
all species →
DomainZinc finger, LIM-typeInterproscan
IPR017899
all species →
DomainVacuolar protein sorting-associated, VPS28, C-terminalInterproscan
IPR007143
all species →
FamilyVacuolar protein sorting-associated Vps28Interproscan
IPR037206
all species →
Homologous_superfamilyVPS28, C-terminal domain superfamilyInterproscan
IPR006301
all species →
FamilyFlagellar biosynthesis protein FlhAInterproscan
IPR001712
all species →
FamilyType III secretion system FHIPEPInterproscan
IPR025505
all species →
Conserved_siteFHIPEP conserved siteInterproscan
IPR042193
all species →
Homologous_superfamilyFHIPEP, domain 3Interproscan
IPR042194
all species →
Homologous_superfamilyFHIPEP, domain 1Interproscan
IPR042196
all species →
Homologous_superfamilyFHIPEP, domain 4Interproscan
IPR028994
all species →
Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR013517
all species →
RepeatFG-GAP repeatInterproscan
IPR000073
all species →
DomainAlpha/beta hydrolase fold-1Interproscan
IPR050266
all species →
FamilyAB hydrolase superfamilyInterproscan
IPR029058
all species →
Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11557
all species →
PORPHOBILINOGEN DEAMINASEInterproscan
PTHR30161
all species →
FLAGELLAR EXPORT PROTEIN, MEMBRANE FLHA SUBUNIT-RELATEDInterproscan
PTHR43798
all species →
MONOACYLGLYCEROL LIPASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004418
all species →
Molecular Functionhydroxymethylbilane synthase activityInterproscan
GO:0033014
all species →
Biological Processtetrapyrrole biosynthetic processInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0006783
all species →
Biological Processheme biosynthetic processInterproscan
GO:0000813
all species →
Cellular ComponentESCRT I complexInterproscan
GO:0032509
all species →
Biological Processendosome transport via multivesicular body sorting pathwayInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0044780
all species →
Biological Processbacterial-type flagellum assemblyInterproscan
GO:0009306
all species →
Biological Processprotein secretionInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0005739
all species →
Cellular ComponentmitochondrionInterproscan
GO:0046464
all species →
Biological Processacylglycerol catabolic processInterproscan
GO:0047372
all species →
Molecular Functionmonoacylglycerol lipase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01749hemC, HMBS; hydroxymethylbilane synthaseEC:2.5.1.61
Porphyrin metabolismko00860deepkoala
K02400flhA; flagellar biosynthesis protein FlhA-Bacterial motility proteinsko02035deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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