Detailed information of g255.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBT4527574.1, flagellar biosynthesis protein FlhA [Deltaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P35620Flagellar biosynthesis protein FlhA OS=Bacillus subtilis (strain 168) OX=224308 GN=flhA PE=1 SV=2
Q56887Flagellar biosynthesis protein FlhA OS=Yersinia enterocolitica OX=630 GN=flhA PE=3 SV=1
P40729Flagellar biosynthesis protein FlhA OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=flhA PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05485THAPTHAP domainDomainInterproscan
PF01379Porphobil_deamPorphobilinogen deaminase, dipyromethane cofactor binding domainDomainInterproscan
PF03900Porphobil_deamCPorphobilinogen deaminase, C-terminal domainDomainInterproscan
PF00412LIMLIM domainDomainInterproscan
PF03997VPS28VPS28 proteinFamilyInterproscan
PF00771FHIPEPFHIPEP familyFamilyInterproscan
PF13517FG-GAP_3FG-GAP-like repeatRepeatInterproscan
PF00561Abhydrolase_1alpha/beta hydrolase foldDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001849DomainPleckstrin homology domainInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR000860FamilyPorphobilinogen deaminaseInterproscan
IPR022417DomainPorphobilinogen deaminase, N-terminalInterproscan
IPR022418DomainPorphobilinogen deaminase, C-terminalInterproscan
IPR036803Homologous_superfamilyPorphobilinogen deaminase, C-terminal domain superfamilyInterproscan
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR017899DomainVacuolar protein sorting-associated, VPS28, C-terminalInterproscan
IPR007143FamilyVacuolar protein sorting-associated Vps28Interproscan
IPR037206Homologous_superfamilyVPS28, C-terminal domain superfamilyInterproscan
IPR006301FamilyFlagellar biosynthesis protein FlhAInterproscan
IPR001712FamilyType III secretion system FHIPEPInterproscan
IPR025505Conserved_siteFHIPEP conserved siteInterproscan
IPR042193Homologous_superfamilyFHIPEP, domain 3Interproscan
IPR042194Homologous_superfamilyFHIPEP, domain 1Interproscan
IPR042196Homologous_superfamilyFHIPEP, domain 4Interproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR000073DomainAlpha/beta hydrolase fold-1Interproscan
IPR050266FamilyAB hydrolase superfamilyInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11557PORPHOBILINOGEN DEAMINASEInterproscan
PTHR30161FLAGELLAR EXPORT PROTEIN, MEMBRANE FLHA SUBUNIT-RELATEDInterproscan
PTHR43798MONOACYLGLYCEROL LIPASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004418Molecular Functionhydroxymethylbilane synthase activityInterproscan
GO:0033014Biological Processtetrapyrrole biosynthetic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006783Biological Processheme biosynthetic processInterproscan
GO:0000813Cellular ComponentESCRT I complexInterproscan
GO:0032509Biological Processendosome transport via multivesicular body sorting pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0044780Biological Processbacterial-type flagellum assemblyInterproscan
GO:0009306Biological Processprotein secretionInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0046464Biological Processacylglycerol catabolic processInterproscan
GO:0047372Molecular Functionmonoacylglycerol lipase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01749hemC, HMBS; hydroxymethylbilane synthaseEC:2.5.1.61
Bacterial motility proteinsko02035deepkoala
Porphyrin metabolismko00860deepkoala

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