Gene detail

Detailed information of g25597.t1.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_012566844.1, short stature homeobox protein [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
O42250	Visual system homeobox 1 OS=Danio rerio OX=7955 GN=vsx1 PE=1 SV=2
P58304	Visual system homeobox 2 OS=Homo sapiens OX=9606 GN=VSX2 PE=1 SV=1
Q61412	Visual system homeobox 2 OS=Mus musculus OX=10090 GN=Vsx2 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR051775	Family	Homeobox domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24323	CEH-10 HOMEODOMAIN-CONTAINING HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan