Detailed information of g25606.t1 in Acropora digitifera

Genomic Location: chr12Alt:7808503...7813627
NR annotation: XP_029214368.2, pre-mRNA-splicing regulator WTAP-like isoform X1 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7SXL7Pre-mRNA-splicing regulator WTAP OS=Danio rerio OX=7955 GN=wtap PE=2 SV=1
Q6P4K5Pre-mRNA-splicing regulator WTAP OS=Xenopus tropicalis OX=8364 GN=wtap PE=2 SV=1
Q4KLT6Pre-mRNA-splicing regulator WTAP OS=Xenopus laevis OX=8355 GN=wtap PE=2 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17098
all species →		WtapWTAP/Mum2p familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033757
all species →		FamilyPre-mRNA-splicing regulator WTAPInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15217
all species →		WILMS' TUMOR 1-ASSOCIATING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000381
all species →		Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0080009
all species →		Biological Processobsolete mRNA methylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K22824WTAP; pre-mRNA-splicing regulator WTAP-Messenger RNA biogenesisko03019deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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