Detailed information of g2564.t1 in Acropora digitifera

Genomic Location: chr2Alt:1865472...1869794
NR annotation: XP_044173426.1, TNF receptor-associated factor 6-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B6CJY4TNF receptor-associated factor 6 OS=Cercocebus atys OX=9531 GN=TRAF6 PE=2 SV=1
Q9Y4K3TNF receptor-associated factor 6 OS=Homo sapiens OX=9606 GN=TRAF6 PE=1 SV=1
B6CJY5TNF receptor-associated factor 6 OS=Macaca mulatta OX=9544 GN=TRAF6 PE=2 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097
all species →
zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR018957
all species →
DomainZinc finger, C3HC4 RING-typeInterproscan
IPR017907
all species →
Conserved_siteZinc finger, RING-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10131
all species →
TNF RECEPTOR ASSOCIATED FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046872
all species →
Molecular Functionmetal ion bindingInterproscan
GO:0033209
all species →
Biological Processtumor necrosis factor-mediated signaling pathwayInterproscan
GO:0070534
all species →
Biological Processprotein K63-linked ubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g2564.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP