Gene detail

Detailed information of g25684.t1 in Montipora capitata

Genomic Location: Sc0004271:5086...7536
NR annotation: XP_029188244.2, ATPase WRNIP1-like isoform X2 [Acropora millepora]
Species abbreviation MCAPI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96S55	ATPase WRNIP1 OS=Homo sapiens OX=9606 GN=WRNIP1 PE=1 SV=2
Q8CG07	ATPase WRNIP1 OS=Rattus norvegicus OX=10116 GN=Wrnip1 PE=1 SV=1
Q91XU0	ATPase WRNIP1 OS=Mus musculus OX=10090 GN=Wrnip1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005280 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12002 all species →	MgsA_C	MgsA AAA+ ATPase C terminal	Domain	Interproscan
PF16193 all species →	AAA_assoc_2	AAA C-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021886 all species →	Domain	MgsA AAA+ ATPase C-terminal	Interproscan
IPR008921 all species →	Homologous_superfamily	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	Interproscan
IPR032423 all species →	Domain	AAA C-terminal domain	Interproscan
IPR051314 all species →	Family	AAA ATPase RarA/MGS1/WRNIP1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13779 all species →	WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0006260 all species →	Biological Process	DNA replication	Interproscan
GO:0000731 all species →	Biological Process	DNA synthesis involved in DNA repair	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006261 all species →	Biological Process	DNA-templated DNA replication	Interproscan
GO:0008047 all species →	Molecular Function	enzyme activator activity	Interproscan
GO:0017116 all species →	Molecular Function	single-stranded DNA helicase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g25684.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.