Detailed information of g25749.t1 in Montipora capitata

Genomic Location: Sc0004373:783...3386
NR annotation: XP_029198462.2, fimbrin-like [Acropora millepora]
Species abbreviation MCAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DG81Plastin-3 OS=Danio rerio OX=7955 GN=pls3 PE=2 SV=1
Q6P698Plastin-2 OS=Danio rerio OX=7955 GN=lcp1 PE=1 SV=1
Q61233Plastin-2 OS=Mus musculus OX=10090 GN=Lcp1 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001622 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307
all species →		CHCalponin homology (CH) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001589
all species →		Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR036872
all species →		Homologous_superfamilyCH domain superfamilyInterproscan
IPR039959
all species →		FamilyFimbrin/PlastinInterproscan
IPR001715
all species →		DomainCalponin homology domainInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19961
all species →		FIMBRIN/PLASTINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005884
all species →		Cellular Componentactin filamentInterproscan
GO:0032432
all species →		Cellular Componentactin filament bundleInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan
GO:0051017
all species →		Biological Processactin filament bundle assemblyInterproscan
GO:0051639
all species →		Biological Processactin filament network formationInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g25749.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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