Detailed information of g2586.t1 in Acropora digitifera

Genomic Location: chr2Alt:2137395...2142037
NR annotation: XP_015762250.1, PREDICTED: uncharacterized protein LOC107341356 [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0JM59Ubiquitin carboxyl-terminal hydrolase 20 OS=Xenopus tropicalis OX=8364 GN=usp20 PE=2 SV=1
A7Z056Ubiquitin carboxyl-terminal hydrolase 20 OS=Bos taurus OX=9913 GN=USP20 PE=2 SV=1
Q5R5Z6Ubiquitin carboxyl-terminal hydrolase 20 OS=Pongo abelii OX=9601 GN=USP20 PE=2 SV=1
 Gene family
Family typeMembership / link
Ubiquitin familyDUB|USP|USP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00443
all species →		UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018200
all species →		Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR000477
all species →		DomainReverse transcriptase domainInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR050185
all species →		FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan
IPR001394
all species →		DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR028889
all species →		DomainUbiquitin specific protease domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21646
all species →		UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004843
all species →		Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016579
all species →		Biological Processprotein deubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g2586.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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