Gene detail

Detailed information of g2590.t1 in Montipora capitata

Genomic Location: Sc0000040:235393...236359
NR annotation: XP_029179429.2, RNA polymerase-associated protein LEO1-like isoform X2 [Acropora millepora]
Species Montipora capitata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NYV9	RNA polymerase-associated protein LEO1 OS=Danio rerio OX=7955 GN=leo1 PE=1 SV=1
Q8WVC0	RNA polymerase-associated protein LEO1 OS=Homo sapiens OX=9606 GN=LEO1 PE=1 SV=1
Q5XJE5	RNA polymerase-associated protein LEO1 OS=Mus musculus OX=10090 GN=Leo1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007744 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04004 all species →	Leo1	Leo1-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007149 all species →	Family	Leo1-like protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23146 all species →	LEO1 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006368 all species →	Biological Process	transcription elongation by RNA polymerase II	Interproscan
GO:0016593 all species →	Cellular Component	Cdc73/Paf1 complex	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0032968 all species →	Biological Process	positive regulation of transcription elongation by RNA polymerase II	Interproscan
GO:1990269 all species →	Molecular Function	RNA polymerase II C-terminal domain phosphoserine binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g2590.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.