Detailed information of g260.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBU2509920.1, glutamine--fructose-6-phosphate transaminase (isomerizing) [bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8U4D1Glutamine--fructose-6-phosphate aminotransferase [isomerizing] OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=glmS PE=3 SV=3
Q9V249Glutamine--fructose-6-phosphate aminotransferase [isomerizing] OS=Pyrococcus abyssi (strain GE5 / Orsay) OX=272844 GN=glmS PE=3 SV=3
Q8TZ14Glutamine--fructose-6-phosphate aminotransferase [isomerizing] OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) OX=190192 GN=glmS PE=3 SV=3
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF18366zf_ZICZic proteins zinc finger domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00071RasRas familyDomainInterproscan
PF00168C2C2 domainDomainInterproscan
PF13522GATase_6Glutamine amidotransferase domainDomainInterproscan
PF01380SISSIS domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR050329FamilyGLI C2H2-type zinc-fingerInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR041643DomainZIC protein, zinc finger domainInterproscan
IPR037830FamilyZZ-type zinc finger-containing protein 3Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR000008DomainC2 domainInterproscan
IPR039032FamilyRim-likeInterproscan
IPR035490DomainGlmS/FrlB, SIS domain 2Interproscan
IPR035466DomainGlmS/AgaS, SIS domain 1Interproscan
IPR029055Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR001347DomainSIS domainInterproscan
IPR005855FamilyGlucosamine-fructose-6-phosphate aminotransferase, isomerisingInterproscan
IPR017932DomainGlutamine amidotransferase type 2 domainInterproscan
IPR047084DomainGlucosamine-fructose-6-phosphate aminotransferase, isomerising, N-terminal domainInterproscan
IPR046348Homologous_superfamilySIS domain superfamilyInterproscan
IPR043460FamilyMEDAG/TEX26Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19818ZINC FINGER PROTEIN ZIC AND GLIInterproscan
PTHR22705ZINC FINGER, ZZ DOMAIN CONTAINING 3Interproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47978-Interproscan
PTHR12157REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEINInterproscan
PTHR10937GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZINGInterproscan
PTHR33769TESTIS-EXPRESSED PROTEIN 26 ISOFORM X3Interproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0006887Biological ProcessexocytosisInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0042734Cellular Componentpresynaptic membraneInterproscan
GO:0044325Molecular Functiontransmembrane transporter bindingInterproscan
GO:0048167Biological Processregulation of synaptic plasticityInterproscan
GO:0048788Cellular Componentcytoskeleton of presynaptic active zoneInterproscan
GO:0048791Biological Processcalcium ion-regulated exocytosis of neurotransmitterInterproscan
GO:0050806Biological Processpositive regulation of synaptic transmissionInterproscan
GO:0097367Molecular Functioncarbohydrate derivative bindingInterproscan
GO:1901135Biological Processcarbohydrate derivative metabolic processInterproscan
GO:0004360Molecular Functionglutamine-fructose-6-phosphate transaminase (isomerizing) activityInterproscan
GO:1901137Biological Processcarbohydrate derivative biosynthetic processInterproscan
GO:0006002Biological Processfructose 6-phosphate metabolic processInterproscan
GO:0006047Biological ProcessUDP-N-acetylglucosamine metabolic processInterproscan
GO:0006487Biological Processprotein N-linked glycosylationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15297RIMS2, RIM2; regulating synaptic membrane exocytosis protein 2-Peptidases and inhibitorsko01002deepkoala
Transcription factorsko03000deepkoala
Membrane traffickingko04131deepkoala

TOP