Detailed information of g2619.t1 in Acropora digitifera

Genomic Location: chr2Alt:2413679...2414487
NR annotation: XP_015765843.1, PREDICTED: putative cadmium/zinc-transporting ATPase HMA4 [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P58414Probable cadmium-transporting ATPase OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=cadA PE=3 SV=1
Q60048Probable cadmium-transporting ATPase OS=Listeria monocytogenes OX=1639 GN=cadA PE=1 SV=1
O64474Putative cadmium/zinc-transporting ATPase HMA4 OS=Arabidopsis thaliana OX=3702 GN=HMA4 PE=1 SV=2
 Pfam domain
No Pfam domain signature was detected for g2619.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR001757
all species →		FamilyP-type ATPaseInterproscan
IPR036412
all species →		Homologous_superfamilyHAD-like superfamilyInterproscan
IPR023214
all species →		Homologous_superfamilyHAD superfamilyInterproscan
IPR051014
all species →		FamilyCation Transport ATPase Type IBInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48085
all species →		CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005215
all species →		Molecular Functiontransporter activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan
GO:0022857
all species →		Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g2619.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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