Gene detail

Detailed information of g26227.t1.1 in Blastomussa wellsi

Genomic Location: :...
NR annotation: CAH3188839.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

g26227.t1

ATGACTGTTTCGGCTCAAAACGCCTCCACTACCTCATCAAATTCACTTTGTAAGTTACAATGCCCATCTGGCTTCCAGTGCTTCAACAACACCATTCAAACAAGAGTCATAGAATGGGGACACAATGGTCATCTTTGCGATGGCCAGTTTGCTGAACAGTGTTATAATGAAAGAGACCCCTTGGGGTTTAAAAAGGGCCCCAGACAAATTCCTCAAACTGTTATACAGGGGGATAAAGTGATATTCAAACCATCTTCCTCACTCGCTATGGATGTTTTGAACGTTTCAAGAGATATTTACTACAGCTGTGGCTCAAATGGACAAATTGTTCAAAATAGCACAACGAGTTCATTTCAAGTGCCATCACAGTATTTAAATCCACCAGGAATCAAGTATTTTATAACAACTGCCGGCCTTTTAAGTTGCAAATTTGGTATAAGGCTTGAGGTGTACGTGCGCAGCCGTCAACAGTCCGGTTGTGTAAACCCGACAGTGTCTAACTTAGGTGTTTGCAGTGGTGTAGGTCTTTGTGGCAGTGATGCAAGAACCTTCTTTACTCGAAACTACTCGTGTTTATGTTGTGATGCATACAAAGGAAGGTACTGCGAAGAGCTAGACAGTTGTCATGCAAGCAGAAATCAGTGCAGAAATGGTGCAACATGTCATGATGTCACAGATGGCGTATCTGATAGCTTCAATTGTACATGTGTACCTGGGTGGGACGGAACCTTTTGTGAAAATAACATTGATGAATGTAAGTCTAGTCCTTGCAAAAACGGAGGATTCTGTGTTGATTACATTAATAGTTACCAATGTTTGTGCCCACCAGACACAGCAGGAGAGAACTGTCAAATAGTTATTCCAGATCTTTGCGCAGATAACCCATGCGCCAATGGTGGAACATGTGAAAGGTCAGGAGAAAACCGACGGAATTTTACTTGCACATGTCTTCCAAATTTTACTGGAAGAAACTGTACAGTTAACATTACGTCATCGTCCATTGTGTTTACACTCGCAACATCTATTCAAACAAGTAAATTATTTTCCACTACCTTGGTGGGGAATTCTTCCGTTGCTACACGAATGTTGTCTTCCCCATTTGTTTACACAACAAGCTTGAGATTGACATCTTCTGTTCCGAAAGCATCATCCCAAGTAAGCACAAGAGCAAGCAGTTCACAAGACATATCATCCCCAGCTACATCGCAGTTGTCATCTGCATCTAGCAAATTGGCTTCTACACTTTCATCTTCGGTAAAGGAGCCACTTTCAACAGTGAGATTGTCATCTTCAGTTCCGTCAGTTCTTAACACTGATGATTCTTCACTGACTGTTCTTCACTCGTCGCAAGTGACACTTTCATCTGTGCCATTGACAACATCAGTTAGCAGCACTTTTTCACAAGCTGTTACTGTAACCATGGTGACAAGTGGTAGCCCCAGTTTGGTTACAATGACAACGGAATCCATGGAGGGTTTCTCAACAAGACCTGCGTTGTCTTCATCGTTGCACTTCACATCACCTTCATCAAGCCTGATGCCGTCATCATTCTCATCGTCACCATCATTGCTTACATCATCACCAGCCTTCACTGTCACACATTCCACAGGCACAACCTCAGTATTATCTTCGTTCGCCACTTCACATTCTTTAATAACACCAACTTCTTCATCCATAATTAGAACAACTCTACCACCATTGTCTACTGTCTATTACACATCAACTGTGAAGATATCTTCGTCAATGAGTACTGTTCTCATTTCCTCATCTGTAGTGCCCACAATGTTGCCAACTATACCAACTACTCTGCCTCTAATGAACCAAACATGTGTTCACAATCCTTGCAACAATGGGACATGCGTTAACGAGTCATACTTAGGAAACAGGTTTCGTTGTGAATGTCCTTATCCGACTGTTGGTCCTGTATGTACAAGTGAGTTTGATCTTCACTTTCCAGCATTTGGAAAGAAATCCTATCTCGAACACAAGAGTATTTCATTTAATTCCGAAGAAAACAGGATTGACATAACCTTCCAGACAAACGCTAACAATGGGCTCCTTATATTTGCTGCCGACCACAAAGAGCGTGGTGATTTTATCCAGCTGCGTGTTGTCGGTGGAAAGTTGGAGTTCCGATTTGATCCTGGCGACAGTTTAGTGTTTATTCAAAGTCATGATAGAGTCAATACTGGTGAAGTAGTTATGGCGACTGTCACCTATGTCAGCAATGCGAAAACAGCTTTTGGAACTTTACAAGTTGGCAATGGTGCACAAGTTAAGCGTGAAGTCACTGGAAGGCTCCGAGGGATACAACTCTACACCAGCTGGTATATTGGTGGTGTACCAGAAAACTTCAATATGCTCAGCAAAACTAAAGGCAATGCTGCTCCGTCATCCTCCTTTGTCGGGTCTATCAGAGATGTGCAAGTTAATGGAGAAACTATCAGCTTTGCAGATGCTAAAGAGTGGTTTAACATCAATGAAGGTGACATGCCGCCCTGCCAAAGAATGCCATGCAAGAACAATGGAGTATGCATCCCTCATGAGGATAACTTGCATGATTACAGATGTAATTGCACTGTAGGATTCTCTGGAAAGAACTGTGAAAATCACACCGCTTGTCAATCGGAGAATTGCAATGGCGGAGAGTGTATACCGAATGATTCCAATCCCCTAGACTTTGTTTGTCTTTGTCCCCTGGGAAGGGTCGGAGTGCAATGCCAAACAGTAATCAACATAACGGTGCCATTGTTCACTATTGTACAAGGCTTCCCATCATACCTAGAGTACCCAGCACCCAAAGATGCAGTGAAGAGCTCTCATGTAACATTCCAGTTTAAGCTCGACAACTCGTCCACGTCTTGGAATGACAGCCTGTTGGTTTACACTGCACAGAATAAATTCCTAGGCAGTGGCGATGATTTCTTTGCAGTTGGATTGAAAAACAACAAGGTCTTGTTACAATATAATCTTGGTAGCGGCAGTGCTCGGATTTACAGTGAGCCACTGGACACAAGTAAAGAGTGGCATTTGGTGGTCGCTGGACGGGATGGGCGGAATGGCTGGCTTTATGTGGATAATCAAACACGTAAAGAAGGCAAATCAGATCCCCCTCTTGTTGGGCTTAACTTGTTTGAACCACTTTACATTGGTGGTATTCCTGACCCACGCCAGCTGCCAAGTGTTTTGGAGTTCAAAAGTGGAGGATTTCATGGCTCTATTTATGATGCGGCCATTAAATTTGACGTTAGAGAATCATTCATCCAACTCTTAACTTCAACAAGTGTGCATGACTCGTCCAAAGAGTGGGCTGTAGTCAGAGGAAGAAATATCGGAAATGAAAGCTACGATGAGTGCTCTTCCCGCACACCACCATGTTCCAATGGAGGAGCCTGCAAGCGAGAAGGCGCAACGTACCTCTGCTCTTGTCCGGTAGAATGGGCTGGCCTGTACTGCACCAGTCGACGTGTGCCATGCTATGGTTATGACAATCCATGTGTTAGTGGTACTTGTCGTCCAGATGGGCAGGATGTTAAGTGTGATTGTCCATTGGGGAAAACGGGACAAATTTGTGATCAAGATATGACAATTCAAACACCGCTGTTCCAGAATTTTTCGTACATGCTGTTTGCGAAGACTGACGTCAGAACTAGTACCAAGATCACTATCAAGTTCAAGCCCTTGGCACTCAATGGGATTCTGTTTTATGTCTCGTATGATGATCAGAGCACCACAGGGGATTTCTTGTCCATTATTCTGCACAATGGGTTTGTTAAGTTTAGGTATGATCTTGGCAAGGGCGTTGGTGAGGCCAAAATCAACGTAACAGTCAGTCTAAATACGTGGAACGAGGTACAAGCAAGTCGAACTGAAAAAGCTGGGAATTTGATCTTGAATGGTGGTGTTCCTGTGAATGTGGTGTCTCCTGGGAGTGCTGTGGCTCTGGACGTTCATTCCAATTTCTACCTGGGAGGAGTCCGCCAGTTGTCGAATGTAAATCCAAACGCTGTAGATAATGATGCTTCATTTGTGCAAGATTTCACGGGATGCATTGATTATTTCGAGGTGAATGGCATCCTATACTTTCAACCAAGCACTGGTGCTATGGAAGGGAGAAATATTGCAAACTGTCCTGAAAGAACGAGTCAACATGAAGCGTAG

Transcript

g26227.t1

Protein

Uniprot

Uniprot term	Description
B8JI71	Protein eyes shut homolog OS=Danio rerio OX=7955 GN=eys PE=1 SV=2
P31696	Agrin OS=Gallus gallus OX=9031 GN=AGRN PE=1 SV=3
B4F785	Pikachurin OS=Rattus norvegicus OX=10116 GN=Egflam PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12661	hEGF	Human growth factor-like EGF	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF02210	Laminin_G_2	Laminin G domain	Domain	Interproscan
PF00054	Laminin_G_1	Laminin G domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001791	Domain	Laminin G domain	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR050372	Family	Neurexin-related cell adhesion and synaptic protein	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR013032	Conserved_site	EGF-like, conserved site	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15036	PIKACHURIN-LIKE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19601	EYS; protein eyes shut	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala