Detailed information of g2627.t1 in Acropora digitifera

Genomic Location: chr2Alt:2512158...2524667
NR annotation: XP_029212905.2, uncharacterized protein LOC114976601 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q924A2Protein capicua homolog OS=Mus musculus OX=10090 GN=Cic PE=1 SV=2
Q96RK0Protein capicua homolog OS=Homo sapiens OX=9606 GN=CIC PE=1 SV=3
Q04891Transcription factor SOX-13 OS=Mus musculus OX=10090 GN=Sox13 PE=1 SV=4
 Gene family
Family typeMembership / link
Transcription factor familybHLH · all TF in this species
Transcription factor familyHMG · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505
all species →		HMG_boxHMG (high mobility group) boxDomainInterproscan
PF07496
all species →		zf-CWCW-type Zinc FingerDomainInterproscan
PF00010
all species →		HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036638
all species →		Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR009071
all species →		DomainHigh mobility group box domainInterproscan
IPR011598
all species →		DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR011124
all species →		DomainZinc finger, CW-typeInterproscan
IPR036910
all species →		Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR050140
all species →		FamilySRY-related HMG-box transcription factorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10270
all species →		SOX TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046983
all species →		Molecular Functionprotein dimerization activityInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g2627.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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