Gene detail

Detailed information of g26451.t1.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029205302.1, glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

g26451.t1

ATGTCAGACTTTTCTACACTATTATCTAATGCGTTCCTTTCTTTTCTAGGAATATTTGCCTATTTGAACTTCTGTGTTCCACGGAAGCGGAAATATATTCTCGAACTTTTGATCAGTGGCCTCCAGAGATTAGAATATAGAGGATACGATTCTGCAGGAGTGGCTTATGATGGAGTTGACAAAATGAGCATTattaaaaaacaaggaaaagttgCTGCCCTTGATGAAGAAATCCAAGCACAAAGTGATTTCACTACTGAAGAAGAACTATCTTGTCACTGTGGTATTGCACACACACGTTGGGCTACACATGGGGAACCAAGTGGCGTCAACAGTCATCCTCAAAGATCAGATCCCAAAAATGAATTTGTGGTGGTTCACAATGGAATCATAACAAACTACAAGGATATCAAGAAATTTTTGgAGGGCAAAGGATTTAGATTTGAGTCTGAAACAGATACAGAGATTATTCCAAAGCTGGTCAAGTATTTCTATGACAAAACGAGAAGGGAAGGTCAAGAGTTAGAGTTCAGAGAACTTGTGGAGATGACAATACAACAACTGGAAGGAGCATTTGCACTTGCCTTTAAGAGCACAAAGTTTCCAGGTGAAATTGTAGCCAGCAGGCGTGGTAGTCCATTACTGATTGGGATCAAGAGTCAATCCCCCCTTAAGACAGACAGGTTGCCAATTGTTTACAGTTCAGGTGACAGTCATGAAGGCGATGAATTTGGGGAGCCTGTGGATACTCTTATGATGAATGGATGGTCAAGTCTTGCATCAAATAAGAACAGCCCTATTGAATATTACTTTGCATCAGATGCAAGCGCTGTTATTGAACACACCAACAGAGTGATTTACATGGAAGATGATGATGTAGCTGCTGTTGTTAATGGAAGTTTGTCAATTCATCGCATTAATCGTGGTGATGCCTCTGATGAAAGCTATTTCAGAGAAGTGCAGACACTGCAAATGGAGTTACAGCAAATCATGAAAGGAAATTACAGCTCTTTTATGCAAAAAGAGATCTTTGAGCAGCCAGAGAGTGTTGTCAACACCATGAGGGGCAGAGTTAACTTTGAATCTGGAAGtgTGCGACTTGGAGGTTTGATGTCTCATATTGATACTATTCGCCGTTGCCGAAGGATTCTAATGATAGCTTGTGGTACAAGTTATCACAGTGCCTTAGCTACAAGACAGTTGTTGGAAGAGCTGACAGAACTACCAgtggttgtagagttagccAGTGACTTCCTTGATCGCTCAACACCAATCTTTAGAGATGATGTGTGCTTCTTTATAAGTCAGTCAGGAGAGACAGCCGACACTCTGATGGCATTGCGCTATTGTAAGGATAGAGGAGCTCTTATAGTGGGCATCACTAATACAGTTGGTAGTTCTATATCCAGGGAAAGTATGTGTGGCTGCCACATTAATGCTGGTCCTGAGATTGGTGTTGCAAGTACAAAGGCCTACACCAGCCAGTTTCTGGCTTTAACAATGTTTGCCCTAATGATGTCTGAAGATAGAATATCCTtgcaagaaaaaaggaaagggaTTATTCAAGGCATGAAACAACTTCCAGACCTCATCAAGAAAGTGCTGAAGCTGGATGAAGAAATTCAGTCCTTGGCACATGAAATGTATCAACAAAAGAGTCTGCTTGTCATGGGCAGAGGTTTCCAGTTTGCCACTTGCCTAGAAGGTGCCCTGAAAATCAAGGAGTTAACTTACATGCATTCAGAAGGTATTCTTGCTGGAGAGCTCAAGCACGGACCTCTAGCACTAGTAGACAAAGCAATGCCAGTCATTATGTTGGTGACAAGAGATTCTGTGTTTAAGAAATGCATGAATGCTTTGCAGCAGGTCACTGCACGTCAGGGCCGCCCAATCATTATTTGCAATGAAGGGGATGAAGAAGTCAAAGCACATGCATTTCGCACACTTGAAGTGCCTAAGACTGTTGACTGTCTCCAAGGAATCTTGTCTGTTATTCCCCTACAGCTGCTTTCTTTCCACATTGCTGTGCTGCGAGGATATGATGTTGACTGTCCTCGAAATTTGGCCAAGTCAGTCACAGTGGAATGA

Transcript

g26451.t1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P82808	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3
Q06210	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Homo sapiens OX=9606 GN=GFPT1 PE=1 SV=3
P47856	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Mus musculus OX=10090 GN=Gfpt1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002143 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13522 all species →	GATase_6	Glutamine amidotransferase domain	Domain	Interproscan
PF01380 all species →	SIS	SIS domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005855 all species →	Family	Glucosamine-fructose-6-phosphate aminotransferase, isomerising	Interproscan
IPR035466 all species →	Domain	GlmS/AgaS, SIS domain 1	Interproscan
IPR001347 all species →	Domain	SIS domain	Interproscan
IPR029055 all species →	Homologous_superfamily	Nucleophile aminohydrolases, N-terminal	Interproscan
IPR046348 all species →	Homologous_superfamily	SIS domain superfamily	Interproscan
IPR017932 all species →	Domain	Glutamine amidotransferase type 2 domain	Interproscan
IPR035490 all species →	Domain	GlmS/FrlB, SIS domain 2	Interproscan
IPR047084 all species →	Domain	Glucosamine-fructose-6-phosphate aminotransferase, isomerising, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10937 all species →	GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004360 all species →	Molecular Function	glutamine-fructose-6-phosphate transaminase (isomerizing) activity	Interproscan
GO:1901137 all species →	Biological Process	carbohydrate derivative biosynthetic process	Interproscan
GO:0097367 all species →	Molecular Function	carbohydrate derivative binding	Interproscan
GO:1901135 all species →	Biological Process	carbohydrate derivative metabolic process	Interproscan
GO:0006002 all species →	Biological Process	fructose 6-phosphate metabolic process	Interproscan
GO:0006047 all species →	Biological Process	UDP-N-acetylglucosamine metabolic process	Interproscan
GO:0006487 all species →	Biological Process	protein N-linked glycosylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00820	glmS, GFPT; glutamine---fructose-6-phosphate transaminase (isomerizing)	EC:2.6.1.16	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.