Detailed information of g265.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_002164125.3, laccase-1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P56193Laccase-1 OS=Thanatephorus cucumeris OX=107832 GN=LCC1 PE=1 SV=1
Q02079Laccase-3 OS=Thanatephorus cucumeris OX=107832 GN=LCC3 PE=2 SV=1
S8FIE4Laccase-1 OS=Fomitopsis schrenkii OX=2126942 GN=LCC1 PE=1 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF08923MAPKK1_IntMitogen-activated protein kinase kinase 1 interactingDomainInterproscan
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF07731Cu-oxidase_2Multicopper oxidaseDomainInterproscan
PF00394Cu-oxidaseMulticopper oxidaseDomainInterproscan
PF07732Cu-oxidase_3Multicopper oxidaseDomainInterproscan
PF00102Y_phosphataseProtein-tyrosine phosphataseDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF12874zf-metZinc-finger of C2H2 typeDomainInterproscan
PF01490Aa_transTransmembrane amino acid transporter proteinFamilyInterproscan
PF05992SbmA_BacASbmA/BacA-like familyFamilyInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF01923Cob_adeno_transCobalamin adenosyltransferaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR050745FamilyMultifunctional regulatory proteinsInterproscan
IPR015019FamilyRagulator complex protein LAMTOR3Interproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR003096FamilySmooth muscle protein/calponinInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR050606FamilyCalponin-likeInterproscan
IPR000160DomainGGDEF domainInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR008972Homologous_superfamilyCupredoxinInterproscan
IPR011706DomainMulticopper oxidase, C-terminalInterproscan
IPR045087FamilyMulticopper oxidaseInterproscan
IPR001117DomainMulticopper oxidase, second cupredoxin domainInterproscan
IPR002355Binding_siteMulticopper oxidase, copper-binding siteInterproscan
IPR011707DomainMulticopper oxidase-like, N-terminalInterproscan
IPR033138Conserved_siteMulticopper oxidases, conserved siteInterproscan
IPR051985FamilyNon-receptor type tyrosine-specific phosphataseInterproscan
IPR000242DomainTyrosine-specific protein phosphatase, PTPase domainInterproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR016130Active_siteProtein-tyrosine phosphatase, active siteInterproscan
IPR000387DomainTyrosine-specific protein phosphatases domainInterproscan
IPR003595DomainProtein-tyrosine phosphatase, catalyticInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR050329FamilyGLI C2H2-type zinc-fingerInterproscan
IPR013057DomainAmino acid transporter, transmembrane domainInterproscan
IPR036640Homologous_superfamilyABC transporter type 1, transmembrane domain superfamilyInterproscan
IPR009248FamilySbmA/BacA-likeInterproscan
IPR051507FamilyPolycomb group RING fingerInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR029499FamilyCorrinoid adenosyltransferase, PduO-typeInterproscan
IPR036451Homologous_superfamilyCobalamin adenosyltransferase-like superfamilyInterproscan
IPR016030DomainCobalamin adenosyltransferase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24189MYOTROPHINInterproscan
PTHR13378REGULATOR COMPLEX PROTEIN LAMTOR3Interproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47385CALPONINInterproscan
PTHR11709MULTI-COPPER OXIDASEInterproscan
PTHR46047TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 61FInterproscan
PTHR19818ZINC FINGER PROTEIN ZIC AND GLIInterproscan
PTHR22950AMINO ACID TRANSPORTERInterproscan
PTHR45893POLYCOMB GROUP RING FINGER PROTEINInterproscan
PTHR12213CORRINOID ADENOSYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0032006Biological Processregulation of TOR signalingInterproscan
GO:0032008Biological Processpositive regulation of TOR signalingInterproscan
GO:0071230Biological Processcellular response to amino acid stimulusInterproscan
GO:0071986Cellular ComponentRagulator complexInterproscan
GO:0007015Biological Processactin filament organizationInterproscan
GO:0015629Cellular Componentactin cytoskeletonInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0005507Molecular Functioncopper ion bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0004726Molecular Functionnon-membrane spanning protein tyrosine phosphatase activityInterproscan
GO:0019901Molecular Functionprotein kinase bindingInterproscan
GO:0035335Biological Processpeptidyl-tyrosine dephosphorylationInterproscan
GO:0046426Biological Processnegative regulation of receptor signaling pathway via JAK-STATInterproscan
GO:0070373Biological Processnegative regulation of ERK1 and ERK2 cascadeInterproscan
GO:0004725Molecular Functionprotein tyrosine phosphatase activityInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0016311Biological ProcessdephosphorylationInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003333Biological Processamino acid transmembrane transportInterproscan
GO:0005774Cellular Componentvacuolar membraneInterproscan
GO:0015179Molecular FunctionL-amino acid transmembrane transporter activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0015833Biological Processpeptide transportInterproscan
GO:1904680Molecular Functionpeptide transmembrane transporter activityInterproscan
GO:0035102Cellular ComponentPRC1 complexInterproscan
GO:0036353Biological Processobsolete histone H2A-K119 monoubiquitinationInterproscan
GO:0008817Molecular Functioncorrinoid adenosyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04370LAMTOR3, MP1, MAP2K1IP1; ragulator complex protein LAMTOR3-Transcription factorsko03000deepkoala
Cobalamin transport and metabolismko04980deepkoala
mTOR signaling pathwayko04150deepkoala

TOP