Detailed information of g266.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_022783377.1, multidrug resistance protein 1-like [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P08183ATP-dependent translocase ABCB1 OS=Homo sapiens OX=9606 GN=ABCB1 PE=1 SV=3
P23174Phosphatidylcholine translocator ABCB4 OS=Cricetulus griseus OX=10029 GN=ABCB4 PE=2 SV=1
P21440Phosphatidylcholine translocator ABCB4 OS=Mus musculus OX=10090 GN=Abcb4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00664ABC_membraneABC transporter transmembrane regionFamilyInterproscan
PF00005ABC_tranABC transporterDomainInterproscan
PF00659POLO_boxPOLO box duplicated regionFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF19302DUF5915Domain of unknown function (DUF5915)DomainInterproscan
PF08264Anticodon_1Anticodon-binding domain of tRNA ligaseDomainInterproscan
PF00133tRNA-synt_1tRNA synthetases class I (I, L, M and V)DomainInterproscan
PF01795Methyltransf_5MraW methylase familyFamilyInterproscan
PF01248Ribosomal_L7AeRibosomal protein L7Ae/L30e/S12e/Gadd45 familyDomainInterproscan
PF09825BPL_NBiotin-protein ligase, N terminalDomainInterproscan
PF02798GST_NGlutathione S-transferase, N-terminal domainDomainInterproscan
PF14497GST_C_3Glutathione S-transferase, C-terminal domainDomainInterproscan
PF01061ABC2_membraneABC-2 type transporterFamilyInterproscan
PF19055ABC2_membrane_7ABC-2 type transporterFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036640Homologous_superfamilyABC transporter type 1, transmembrane domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR039421FamilyType 1 protein exporterInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR033695DomainSecond polo-box domainInterproscan
IPR000959DomainPOLO box domainInterproscan
IPR033701DomainFirst polo-box domainInterproscan
IPR036947Homologous_superfamilyPOLO box domain superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR033709DomainIsoleucyl tRNA synthetase type 2, anticodon-binding domainInterproscan
IPR002301FamilyIsoleucine-tRNA ligaseInterproscan
IPR009008Homologous_superfamilyValyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainInterproscan
IPR023586FamilyIsoleucine-tRNA ligase, type 2Interproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR013155DomainMethionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR002300DomainAminoacyl-tRNA synthetase, class IaInterproscan
IPR023397Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamilyInterproscan
IPR002903FamilyRibosomal RNA small subunit methyltransferase HInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR004038DomainRibosomal protein eL8/eL30/eS12/Gadd45Interproscan
IPR029064Homologous_superfamilyRibosomal protein eL30-like superfamilyInterproscan
IPR000530FamilySmall ribosomal subunit protein eS12Interproscan
IPR019197DomainBiotin-protein ligase, N-terminalInterproscan
IPR004045DomainGlutathione S-transferase, N-terminalInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR040079FamilyGlutathione transferase familyInterproscan
IPR004046DomainGlutathione S-transferase, C-terminalInterproscan
IPR010987DomainGlutathione S-transferase, C-terminal-likeInterproscan
IPR036282Homologous_superfamilyGlutathione S-transferase, C-terminal domain superfamilyInterproscan
IPR050213FamilyGlutathione S-transferase superfamilyInterproscan
IPR050352FamilyATP-binding cassette subfamily G transportersInterproscan
IPR013525DomainABC-2 type transporter, transmembrane domainInterproscan
IPR043926DomainABC transporter family G domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43394ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIALInterproscan
PTHR24345SERINE/THREONINE-PROTEIN KINASE PLKInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR42780SOLEUCYL-TRNA SYNTHETASEInterproscan
PTHR11265S-ADENOSYL-METHYLTRANSFERASE MRAWInterproscan
PTHR1184340S RIBOSOMAL PROTEIN S12Interproscan
PTHR11571GLUTATHIONE S-TRANSFERASEInterproscan
PTHR48041ABC TRANSPORTER G FAMILY MEMBER 28Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0015421Molecular FunctionABC-type oligopeptide transporter activityInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000776Cellular ComponentkinetochoreInterproscan
GO:0000922Cellular Componentspindle poleInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0007052Biological Processmitotic spindle organizationInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004822Molecular Functionisoleucine-tRNA ligase activityInterproscan
GO:0006428Biological Processisoleucyl-tRNA aminoacylationInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0070475Biological ProcessrRNA base methylationInterproscan
GO:0071424Molecular FunctionrRNA (cytosine-N4-)-methyltransferase activityInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0022627Cellular Componentcytosolic small ribosomal subunitInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0004364Molecular Functionglutathione transferase activityInterproscan
GO:0006749Biological Processglutathione metabolic processInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0042626Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01870IARS, ileS; isoleucyl-tRNA synthetaseEC:6.1.1.5
CD moleculesko04090deepkoala
Ribosomeko03011deepkoala
Ribosome biogenesisko03009deepkoala
Transportersko02000deepkoala
Transportersko02000deepkoala
Transfer RNA biogenesisko03016deepkoala

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