Detailed information of g268.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_022779247.1, protein C21orf2 homolog [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O43822Cilia- and flagella-associated protein 410 OS=Homo sapiens OX=9606 GN=CFAP410 PE=1 SV=1
Q8C6G1Cilia- and flagella-associated protein 410 OS=Mus musculus OX=10090 GN=Cfap410 PE=1 SV=1
Q6ZWJ1Syntaxin-binding protein 4 OS=Homo sapiens OX=9606 GN=STXBP4 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|NZF
Ubiquitin FamilyDUB|OTU|OTU

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16574CEP209_CC5Coiled-coil region of centrosome protein CE290Coiled-coilInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF00641zf-RanBPZn-finger in Ran binding protein and othersDomainInterproscan
PF18418AnkUBDAnkyrin ubiquitin-binding domainRepeatInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF00397WWWW domainDomainInterproscan
PF04199CyclasePutative cyclaseFamilyInterproscan
PF04997RNA_pol_Rpb1_1RNA polymerase Rpb1, domain 1DomainInterproscan
PF14580LRR_9Leucine-rich repeatRepeatInterproscan
PF01225Mur_ligaseMur ligase family, catalytic domainDomainInterproscan
PF02875Mur_ligase_CMur ligase family, glutamate ligase domainDomainInterproscan
PF08245Mur_ligase_MMur ligase middle domainDomainInterproscan
PF02995DUF229Protein of unknown function (DUF229)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026201FamilyCentrosomal protein of 290kDaInterproscan
IPR032321DomainCentrosomal protein of 290kDa, coiled-coil regionInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR036443Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR051346FamilyOTU Domain-Containing DeubiquitinaseInterproscan
IPR041294DomainAnkyrin ubiquitin-binding domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR001478DomainPDZ domainInterproscan
IPR001202DomainWW domainInterproscan
IPR036020Homologous_superfamilyWW domain superfamilyInterproscan
IPR051342FamilyPDZ domain-containing scaffold proteinInterproscan
IPR007325FamilyKynurenine formamidase/cyclase-likeInterproscan
IPR037175Homologous_superfamilyKynurenine formamidase superfamilyInterproscan
IPR045867FamilyDNA-directed RNA polymerase, subunit beta-primeInterproscan
IPR044893Homologous_superfamilyRNA polymerase Rpb1, clamp domain superfamilyInterproscan
IPR007080DomainRNA polymerase Rpb1, domain 1Interproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR000713DomainMur ligase, N-terminal catalytic domainInterproscan
IPR035911Homologous_superfamilyMurE/MurF, N-terminalInterproscan
IPR036565Homologous_superfamilyMur-like, catalytic domain superfamilyInterproscan
IPR004101DomainMur ligase, C-terminalInterproscan
IPR005761FamilyUDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligaseInterproscan
IPR036615Homologous_superfamilyMur ligase, C-terminal domain superfamilyInterproscan
IPR013221DomainMur ligase, centralInterproscan
IPR004245FamilyProtein of unknown function DUF229Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18879CENTROSOMAL PROTEIN OF 290 KDAInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR13367UBIQUITIN THIOESTERASEInterproscan
PTHR19964MULTIPLE PDZ DOMAIN PROTEINInterproscan
PTHR31118CYCLASE-LIKE PROTEIN 2Interproscan
PTHR19376DNA-DIRECTED RNA POLYMERASEInterproscan
PTHR18849LEUCINE RICH REPEAT PROTEINInterproscan
PTHR23135MUR LIGASE FAMILY MEMBERInterproscan
PTHR10974UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0034451Cellular Componentcentriolar satelliteInterproscan
GO:0035869Cellular Componentciliary transition zoneInterproscan
GO:0097711Biological Processciliary basal body-plasma membrane dockingInterproscan
GO:1905349Biological Processciliary transition zone assemblyInterproscan
GO:1905515Biological Processnon-motile cilium assemblyInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0070530Molecular FunctionK63-linked polyubiquitin modification-dependent protein bindingInterproscan
GO:0071947Biological Processprotein deubiquitination involved in ubiquitin-dependent protein catabolic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004061Molecular Functionarylformamidase activityInterproscan
GO:0019441Biological Processtryptophan catabolic process to kynurenineInterproscan
GO:0001056Molecular FunctionRNA polymerase III activityInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0005666Cellular ComponentRNA polymerase III complexInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0016881Molecular Functionacid-amino acid ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0008360Biological Processregulation of cell shapeInterproscan
GO:0051301Biological Processcell divisionInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01928murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligaseEC:6.3.2.13
Cilium and associated proteinsko03037deepkoala
Exosomeko04147deepkoala
Peptidoglycan biosynthesis and degradation proteinsko01011deepkoala

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