Detailed information of g269.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047136294.1, zinc transporter ZIP6 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6PEH9Zinc transporter ZIP10 OS=Danio rerio OX=7955 GN=slc39a10 PE=2 SV=2
Q4V887Zinc transporter ZIP6 OS=Rattus norvegicus OX=10116 GN=Slc39a6 PE=1 SV=1
Q9ULF5Zinc transporter ZIP10 OS=Homo sapiens OX=9606 GN=SLC39A10 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00431CUBCUB domainDomainInterproscan
PF14670FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF21788TNP-like_GBDTNP-like, GTP-binding insertion domainDomainInterproscan
PF21787TNP-like_RNaseH_NTNP-like, RNase H N-terminal domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF00071RasRas familyDomainInterproscan
PF02535ZipZIP Zinc transporterFamilyInterproscan
PF01053Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzymeDomainInterproscan
PF08245Mur_ligase_MMur ligase middle domainDomainInterproscan
PF21799MurD-like_NMur ligase MurD-like, N-terminal domainDomainInterproscan
PF09773MeckelinMeckelin (Transmembrane protein 67)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000859DomainCUB domainInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR051277FamilySEZ6/CSMD/C4BPB Neuronal & Immune RegulatorsInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR048366DomainTransposable element P transposase-like, GTP-binding insertion domainInterproscan
IPR048365DomainTransposable element P transposase-like, RNase H domain, N-terminalInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR050663FamilyAnkyrin Repeat and SOCS BoxInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR040250FamilyNucleobindinInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR001806FamilySmall GTPaseInterproscan
IPR037874FamilyCdc42Interproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003578FamilySmall GTPase RhoInterproscan
IPR003689FamilyZinc/iron permeaseInterproscan
IPR050799FamilyZinc Iron Protein (ZIP) TransporterInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR006235FamilyO-acetylhomoserine/O-acetylserine sulfhydrylaseInterproscan
IPR000277FamilyCys/Met metabolism, pyridoxal phosphate-dependent enzymeInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR013221DomainMur ligase, centralInterproscan
IPR036615Homologous_superfamilyMur ligase, C-terminal domain superfamilyInterproscan
IPR036565Homologous_superfamilyMur-like, catalytic domain superfamilyInterproscan
IPR005762FamilyUDP-N-acetylmuramoylalanine-D-glutamate ligase MurDInterproscan
IPR019170FamilyMeckelinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45656PROTEIN CBR-CLEC-78Interproscan
PTHR24193ANKYRIN REPEAT PROTEINInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR19237NUCLEOBINDINInterproscan
PTHR24072RHO FAMILY GTPASEInterproscan
PTHR12191SOLUTE CARRIER FAMILY 39Interproscan
PTHR43797HOMOCYSTEINE/CYSTEINE SYNTHASEInterproscan
PTHR43692UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASEInterproscan
PTHR21274UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005793Cellular Componentendoplasmic reticulum-Golgi intermediate compartmentInterproscan
GO:0070062Cellular Componentextracellular exosomeInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0006897Biological ProcessendocytosisInterproscan
GO:0007163Biological Processestablishment or maintenance of cell polarityInterproscan
GO:0007264Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0019901Molecular Functionprotein kinase bindingInterproscan
GO:0032488Biological ProcessCdc42 protein signal transductionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030001Biological Processmetal ion transportInterproscan
GO:0046873Molecular Functionmetal ion transmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005385Molecular Functionzinc ion transmembrane transporter activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006875Biological Processobsolete intracellular metal ion homeostasisInterproscan
GO:0071578Biological Processzinc ion import across plasma membraneInterproscan
GO:0140410Molecular Functionmonoatomic cation:bicarbonate symporter activityInterproscan
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0016765Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groupsInterproscan
GO:0019346Biological ProcesstranssulfurationInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0016881Molecular Functionacid-amino acid ligase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008360Biological Processregulation of cell shapeInterproscan
GO:0008764Molecular FunctionUDP-N-acetylmuramoylalanine-D-glutamate ligase activityInterproscan
GO:0051301Biological Processcell divisionInterproscan
GO:0035869Cellular Componentciliary transition zoneInterproscan
GO:0036038Cellular ComponentMKS complexInterproscan
GO:0060271Biological Processcilium assemblyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20371NUCB; nucleobindin-Transportersko02000deepkoala
GTP-binding proteinsko04031deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala

TOP