Detailed information of g27064.t1 in Acropora digitifera

Genomic Location: chr13Alt:612863...632771
NR annotation: XP_044184394.1, small G protein signaling modulator 3-like isoform X3 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96HU1Small G protein signaling modulator 3 OS=Homo sapiens OX=9606 GN=SGSM3 PE=1 SV=1
Q8VCZ6Small G protein signaling modulator 3 OS=Mus musculus OX=10090 GN=Sgsm3 PE=1 SV=1
A6H8I2Small G protein signaling modulator 3 homolog OS=Xenopus laevis OX=8355 GN=sgsm3 PE=2 SV=1
 Gene family
Family typeMembership / link
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018
all species →
SH3_1SH3 domainDomainInterproscan
PF00566
all species →
RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050302
all species →
FamilyRab GTPase-activating TBC domain-containing proteinInterproscan
IPR001452
all species →
DomainSH3 domainInterproscan
IPR000195
all species →
DomainRab-GAP-TBC domainInterproscan
IPR036028
all species →
Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR035969
all species →
Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR035833
all species →
DomainSGSM3, SH3 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47219
all species →
RAB GTPASE-ACTIVATING PROTEIN 1-LIKEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g27064.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP