Detailed information of g271.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_022789849.1, probable RNA methyltransferase Y17G7B.18 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7L2J07SK snRNA methylphosphate capping enzyme OS=Homo sapiens OX=9606 GN=MEPCE PE=1 SV=1
A3KQ557SK snRNA methylphosphate capping enzyme OS=Danio rerio OX=7955 GN=mepce PE=3 SV=2
Q8K3A97SK snRNA methylphosphate capping enzyme OS=Mus musculus OX=10090 GN=Mepce PE=1 SV=2
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF03357Snf7Snf7FamilyInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF02037SAPSAP domainDomainInterproscan
PF00644PARPPoly(ADP-ribose) polymerase catalytic domainFamilyInterproscan
PF05406WGRWGR domainDomainInterproscan
PF02877PARP_regPoly(ADP-ribose) polymerase, regulatory domainDomainInterproscan
PF17862AAA_lid_3AAA+ lid domainDomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF21236PRS7_OB26S proteasome regulatory subunit 7, OB domainDomainInterproscan
PF01820Dala_Dala_lig_ND-ala D-ala ligase N-terminusFamilyInterproscan
PF07478Dala_Dala_lig_CD-ala D-ala ligase C-terminusFamilyInterproscan
PF12874zf-metZinc-finger of C2H2 typeDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF06859Bin3Bicoid-interacting protein 3 (Bin3)FamilyInterproscan
PF04389Peptidase_M28Peptidase family M28FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR039788FamilyNucleolar protein 4 familyInterproscan
IPR005024FamilySnf7 familyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR050800FamilyADP-ribosyltransferase diphtheria toxin-likeInterproscan
IPR036616Homologous_superfamilyPoly(ADP-ribose) polymerase, regulatory domain superfamilyInterproscan
IPR003034DomainSAP domainInterproscan
IPR036930Homologous_superfamilyWGR domain superfamilyInterproscan
IPR012317DomainPoly(ADP-ribose) polymerase, catalytic domainInterproscan
IPR008893DomainWGR domainInterproscan
IPR004102DomainPoly(ADP-ribose) polymerase, regulatory domainInterproscan
IPR036361Homologous_superfamilySAP domain superfamilyInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR041569DomainAAA ATPase, AAA+ lid domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003960Conserved_siteATPase, AAA-type, conserved siteInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR050221Family26S Proteasome Regulatory ATPaseInterproscan
IPR048723Domain26S proteasome regulatory subunit 7-like, OB domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR005905FamilyD-alanine--D-alanine ligaseInterproscan
IPR011127DomainD-alanine--D-alanine ligase, N-terminal domainInterproscan
IPR016185Homologous_superfamilyPre-ATP-grasp domain superfamilyInterproscan
IPR011761DomainATP-grasp foldInterproscan
IPR013815Homologous_superfamilyATP-grasp fold, subdomain 1Interproscan
IPR011095DomainD-alanine--D-alanine ligase, C-terminalInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR042972FamilyInsulinoma-associated protein 1/2Interproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR010675DomainRNA methyltransferase bin3, C-terminalInterproscan
IPR039772FamilyRNA methyltransferase Bin3-likeInterproscan
IPR024160DomainBin3-type S-adenosyl-L-methionine binding domainInterproscan
IPR007484DomainPeptidase M28Interproscan
IPR016574FamilyNicalinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12449DEATH DOMAIN-CONTAINING PROTEINInterproscan
PTHR10476CHARGED MULTIVESICULAR BODY PROTEINInterproscan
PTHR35317OS04G0629600 PROTEINInterproscan
PTHR10459DNA LIGASEInterproscan
PTHR2307326S PROTEASOME REGULATORY SUBUNITInterproscan
PTHR23132D-ALANINE--D-ALANINE LIGASEInterproscan
PTHR47501TRANSPOSASE-RELATEDInterproscan
PTHR15065INSULINOMA-ASSOCIATED 1Interproscan
PTHR12315BICOID-INTERACTING PROTEIN RELATEDInterproscan
PTHR31826NICALINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007034Biological Processvacuolar transportInterproscan
GO:0000815Cellular ComponentESCRT III complexInterproscan
GO:0005771Cellular Componentmultivesicular bodyInterproscan
GO:0015031Biological Processprotein transportInterproscan
GO:0032509Biological Processendosome transport via multivesicular body sorting pathwayInterproscan
GO:0045324Biological Processlate endosome to vacuole transportInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003950Molecular FunctionNAD+-protein poly-ADP-ribosyltransferase activityInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan
GO:0070212Biological Processprotein poly-ADP-ribosylationInterproscan
GO:1990404Molecular FunctionNAD+-protein ADP-ribosyltransferase activityInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0008540Cellular Componentproteasome regulatory particle, base subcomplexInterproscan
GO:0036402Molecular Functionproteasome-activating activityInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008716Molecular FunctionD-alanine-D-alanine ligase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0009252Biological Processpeptidoglycan biosynthetic processInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0001227Molecular FunctionDNA-binding transcription repressor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010564Biological Processregulation of cell cycle processInterproscan
GO:0017053Cellular Componenttranscription repressor complexInterproscan
GO:0030182Biological Processneuron differentiationInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0008171Molecular FunctionO-methyltransferase activityInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0017069Molecular FunctionsnRNA bindingInterproscan
GO:0040031Biological ProcesssnRNA modificationInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0009966Biological Processregulation of signal transductionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01921ddl; D-alanine-D-alanine ligaseEC:6.3.2.4
Transcription machineryko03021deepkoala
DNA repair and recombination proteinsko03400deepkoala
Proteasomeko03051deepkoala
Peptidoglycan biosynthesis and degradation proteinsko01011deepkoala

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