Gene detail

Detailed information of g27103.t1 in Montipora capitata

Genomic Location: xfSc0000004:402463...417563
NR annotation: XP_044168921.1, uncharacterized protein LOC114961387 isoform X2 [Acropora millepora]
Species Montipora capitata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g27103.t1

atgccacgtggcgagaacggcatgcgagtttcttggtccattcccagtgccaaagactgtaatggcagaatcaccaagtacgagattgtggtgtataagcaaaatggcgatgtgcgaacttacctgagcggcgagaagacactatcaaaagatgtcactggattggaagccaatcaacacttttatatcggagtacgcgcttatacaattgttggacctgggccttacagcatgaatcagagtcattcaacagtactcagccaacagtcgcaagtaacaaaagccttagaaaaactcaacaagggagattcaggtagctttcccaaaagcataaaccgtagtgaactgtttcctctccagattccggttacgagtagcaacgccctcaaagttgtgacagaagtacggaatatcacttccaagccgtcgaaactgttgcagaaggatctgtcagtcacagcaaagatcctagataacgtggtcaaaacaaacgtcacttccgttgatgtcggtgatcaagtgttgcataccataagtcacgtgatggatgcgaacccaaaagtattggaagatgcgcaaaggaagaacaacaaatctgcgagattcgttcagattatcgaagattacctcgacaagggaggaaaattcagcaaaggaacatcaaatattggtgttcacacgcaggtcatcactaaaactggcagtgacattggcgtcgccgtcaaagccacagatgacaacatcgctattaacacgaccaacaatggtacaagtgaagatagcgaagcaagtataacagtgcccggatcgattctaagtgggaacgataccgataactcaacgttgattgtggtgtactatcgcacaagcaagctctttgcgcccgagtaccggaaggcggaagtgtgcgaggacggtttcaccaaggaaaaggatcacaaactggaaaggtcagaaacgtccagttacaccatggagaattcaaccggaagcagagtcacgacaagcagtcctgtgttgtctgcaagtttgagaaataaagaggtgtccaacttgaccacacctgtgattatcaagtttaaaatgccgcgagaggaggtgataaagagcagtacaaggtgtgtttggtgggattttcaaaaacgtggatggtcgaccgctggatgttctctccgcggcatcgttaacgacacgattatttgcgaatgcaatcacatgaccaactttgccgccttagtggatcttgatggcccatcatcgaaagcgtgcggcaaacattccactgcgctgtcactcatcagctacatcggttgcgcattatcaattgtcggattaacgctgaccatcttaacctttgcatttttcaaaaaacttcgaaaggatcagattgctgccaagattcttcttcatctttgcgcctcgcttctgtgtgtactgattgtgtttgtggcaggggtggagaggggaactgtgtcagaggatgcctgtcgcattgtagcagctcttgtgcattacttcttgctggtagcatttttatggatgttgatcgaagcatacttcatgtatcaagcttttgttaaagtgtttcgagattacggagaacacgtcatgtggaagtgttccgcactgggttgggggcttccattcgtggttgttgtgattaccattgctgtggataaaaccagttatggtggaaaacactactgtcgtcttggagacatagcattcttcgcgtcgttcgctgctccagtcgtgtttgtgatgcttgtcaacaccatcacattttctctcattatgtataaacttgccacccgtccgcccaacgcagctgacccaagtggtggaagtgaaggacttcttaagatcaaacgcgcttttgggattttgatccttgtgggcattacttgggtatttggtttctttgcaatagccgatgcccgcctcgtattccattacttatttgcaatctgcaacagtcttcaaggctttgcaatcttcgttttttattgcgtcatacaaagaaaagtgcgcgaatgttggtgggcccttctgacgtgtaacttgcgcagtctaaagaagtccaagtccttgttcacagactcgaactatgatcgcaggcgcctgtcctcggccagcagagcgcagttggatacaatgcgccccagaattaacacggcgatgtcgcaggtgcaaattacgttaccacgtgacccacagaatccccctcccgatgtggttcgggattgccctcaccatagcaacgtagtgtacgaggacgacagcccgtatccaagcttaaacattgagtcagttgattaccaactgaatgaaatgagtggaagccaaacaatagagatgaatgattcttgggactatcattcaatgcgcgtctcctatcgcgcagattccaggtcgccgagcttaagatcccacggaatgaacctcgctccttcccataattctagtgtgcaagcatctccagcaagctcagcacattcctcgccgaaaatattgaggtcgcctcgaatctttccactacaaacacgccaagcacctcgcgaaagcacgccacgtcaggattatcctttaaaagagactttaaaaagaactgcgtcgcacacacccgcagctacgacgagaccagcaaaccgctcgttactcaggagaacaaaatcagctagcctttctctggaagatctacgattcagtgctgattttagcgtaagcagtgatcaaacgtcatgggagtcattaagttcagaagcagcgaccccaacgaagaaacagcttcttggtgttccatttggtgaacaaatcgttggaccgattagaggctcgatcaggggctttgtaggatacgtggaaacgactgttgaaaacttcgacctgctgattgacttacagcggctgaggtcacagtcttctcccgctcatccggacgaccaagtctaa

Transcript

g27103.t1

ATGCCACGTGGCGAGAACGGCATGCGAGTTTCTTGGTCCATTCCCAGTGCCAAAGACTGTAATGGCAGAATCACCAAGTACGAGATTGTGGTGTATAAGCAAAATGGCGATGTGCGAACTTACCTGAGCGGCGAGAAGACACTATCAAAAGATGTCACTGGATTGGAAGCCAATCAACACTTTTATATCGGAGTACGCGCTTATACAATTGTTGGACCTGGGCCTTACAGCATGAATCAGAGTCATTCAACAGtaCTCAGCCAACAGTCGCAAGTAACAAAAGCCTTAGAAAAACTCAACAAGGGAGATTCAGGTAGCTTTCCCAAAAGCATAAACCGTAGTGAACTGTTTCCTCTCCAGATTCCGGTTACGAGTAGCAACGCCCTCAAAGTTGTGACAGAAGTACGGAATATCACTTCCAAGCCGTCGAAACTGTTGCAGAAGGATCTGTCAGTCACAGCAAAGATCCTAGATAACGTGGTCAAAACAAACGTCACTTCCGTTGATGTCGGTGATCAAGTGTTGCATACCATAAGTCACGTGATGGATGCGAACCCAAAAGTATTGGAAGATGCGCAAAGGAAGAACAACAAATCTGCGAGATTCGTTCAGATTATCGAAGATTACCTCGACAAGGGAGGAAAATTCAGCAAAGGAACATCAAATATTGGTGTTCACACGCAGGTCATCACTAAAACTGGCAGTGACATTGGCGTCGCCGTCAAAGCCACAGATGACAACATCGCTATTAACACGACCAACAATGGTACAAGTGAAGATAGCGAAGCAAGTATAACAGTGCCCGGATCGATTCTAAGTGGGAACGATACCGATAACTCAACGTTGATTGTGGTGTACTATCGCACAAGCAAGCTCTTTGCGCCCGAGTACCGGAAGGCGGAAGTGTGCGAGGACGGTTTCACCAAGGAAAAGGATCACAAACTGGAAAGGTCAGAAACGTCCAGTTACACCATGGAGAATTCAACCGGAAGCAGAGTCACGACAAGCAGTCCTGTGTTGTCTGCAAGTTTGAGAAATAAAGAGGTGTCCAACTTGACCACACCTGTGATTATCAAGTTTAAAATGCCGCGAGAGGAGGTGATAAAGAGCAGTACAAGGTGTGTTTGGTGGGATTTTCAAAAACGTGGATGGTCGACCGCTGGATGTTCTCTCCGCGGCATCGTTAACGACACGATTATTTGCGAATGCAATCACATGACCAACTTTGCCGCCTTAGTGGATCTTGATGGCCCATCATCGAAAGCGTGCGGCAAACATTCCACTGCGCTGTCACTCATCAGCTACATCGGTTGCGCATTATCAATTGTCGGATTAACGCTGACCATCTTAACCTTTGCATTTTTCAAAAAACTTCGAAAGGATCAGATTGCTGCCAAGATTCTTCTTCATCTTTGCGCCTCGCTTCTGTGTGTACTGATTGTGTTTGTGGCAGGGGTGGAGAGGGGAACTGTGTCAGAGGATGCCTGTCGCATTGTAGCAGCTCTTGTGCATTACTTCTTGCTGGTAGCATTTTTATGGATGTTGATCGAAGCATACTTCATGTATCAAGCTTTTGTTAAAGTGTTTCGAGATTACGGAGAACACGTCATGTGGAAGTGTTCCGCACTGGGTTGGGGGCTTCCATTCGTGGTTGTTGTGATTACCATTGCTGTGGATAAAACCAGTTATGGTGGAAAACACTACTGTCGTCTTGGAGACATAGCATTCTTCGCGTCGTTCGCTGCTCCAGTCGTGTTTGTGATGCTTGTCAACACCATCACATTTTCTCTCATTATGTATAAACTTGCCACCCGTCCGCCCAACGCAGCTGACCCAAGTGGTGGAAGTGAAGGACTTCTTAAGATCAAACGCGCTTTTGGGATTTTGATCCTTGTGGGCATTACTTGGGTATTTGGTTTCTTTGCAATAGCCGATGCCCGCCTCGTATTCCATTACTTATTTGCAATCTGCAACAGTCTTCAAGGCTTTGCAATCTTCGTTTTTTATTGCGTCATACAAAGAAAAGTGCGCGAATGTTGGTGGGCCCTTCTGACGTGTAACTTGCGCAGTCTAAAGAAGTCCAAGTCCTTGTTCACAGACTCGAACTATGATCGCAGGCGCCTGTCCTCGGCCAGCAGAGCGCAGTTGGATACAATGCGCCCCAGAATTAACACGGCGATGTCGCAGGTGCAAATTACGTTACCACGTGACCCACAGAATCCCCCTCCCGATGTGGTTCGGGATTGCCCTCACCATAGCAACGTAGTGTACGAGGACGACAGCCCGTATCCAAGCTTAAACATTGAGTCAGTTGATTACCAACTGAATGAAATGAGTGGAAGCCAAACAATAGAGATGAATGATTCTTGGGACTATCATTCAATGCGCGTCTCCTATCGCGCAGATTCCAGGTCGCCGAGCTTAAGATCCCACGGAATGAACCTCGCTCCTTCCCATAATTCTAGTGTGCAAGCATCTCCAGCAAGCTCAGCACATTCCTCGCCGAAAATATTGAGGTCGCCTCGAATCTTTCCACTACAAACACGCCAAGCACCTCGCGAAAGCACGCCACGTCAGGATTATCCTTTAAAAGAGACTTTAAAAAGAACTGCGTCGCACACACCCGCAGCTACGACGAGACCAGCAAACCGCTCGTTACTCAGGAGAACAAAATCAGCTAGCCTTTCTCTGGAAGATCTACGATTCAGTGCTGATTTTAGCGTAAGCAGTGATCAAACGTCATGGGAGTCATTAAGTTCAGAAGCAGCGACCCCAACGAAGAAACAGCTTCTTGGTGTTCCATTTGGTGAACAAATCGTTGGACCGATTAGAGGCTCGATCAGGGGCTTTGTAGGATACGTGGAAACGACTGTTGAAAACTTCGACCTGCTGATTGACTTACAGCGGCTGAGGTCACAGTCTTCTCCCGCTCATCCGGACGACCAAGTctaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IZP9	Adhesion G-protein coupled receptor G2 OS=Homo sapiens OX=9606 GN=ADGRG2 PE=1 SV=2
Q8CJ11	Adhesion G-protein coupled receptor G2 OS=Rattus norvegicus OX=10116 GN=Adgrg2 PE=1 SV=1
B7ZCC9	Adhesion G-protein coupled receptor G4 OS=Mus musculus OX=10090 GN=Adgrg4 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004179 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00002 all species →	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF01825 all species →	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000832 all species →	Family	GPCR, family 2, secretin-like	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR017983 all species →	Conserved_site	GPCR, family 2, secretin-like, conserved site	Interproscan
IPR046338 all species →	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR000203 all species →	Conserved_site	GPS motif	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45692 all species →	G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04593	ADGRL2, LPHN2; adhesion G protein-coupled receptor L2	-	G protein-coupled receptors	ko04030	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.