Gene detail

Detailed information of g2715.t1 in Acropora digitifera

Genomic Location: chr2Alt:3580379...3582739
NR annotation: XP_015756342.1, PREDICTED: probable 28S ribosomal protein S16, mitochondrial [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9V6Y3	Small ribosomal subunit protein bS16m OS=Drosophila melanogaster OX=7227 GN=mRpS16 PE=2 SV=1
Q5REY4	Small ribosomal subunit protein bS16m OS=Pongo abelii OX=9601 GN=MRPS16 PE=2 SV=1
P82915	Small ribosomal subunit protein bS16m OS=Bos taurus OX=9913 GN=MRPS16 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00886 all species →	Ribosomal_S16	Ribosomal protein S16	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000307 all species →	Family	Small ribosomal subunit protein bS16	Interproscan
IPR023803 all species →	Homologous_superfamily	Small ribosomal subunit protein bS16 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12919 all species →	30S RIBOSOMAL PROTEIN S16	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0005763 all species →	Cellular Component	mitochondrial small ribosomal subunit	Interproscan
GO:0015935 all species →	Cellular Component	small ribosomal subunit	Interproscan
GO:0032543 all species →	Biological Process	mitochondrial translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02959	RP-S16, MRPS16, rpsP; small subunit ribosomal protein S16	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.