Detailed information of g272.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: RXN38860.1, skeletal receptor tyrosine kinase-like protein [Labeo rohita]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O15146Muscle, skeletal receptor tyrosine-protein kinase OS=Homo sapiens OX=9606 GN=MUSK PE=1 SV=1
Q8AXY6Muscle, skeletal receptor tyrosine protein kinase OS=Gallus gallus OX=9031 GN=MUSK PE=2 SV=1
Q62838Muscle, skeletal receptor tyrosine protein kinase OS=Rattus norvegicus OX=10116 GN=Musk PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE2|UBC|UBC

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan
PF00013KH_1KH domainDomainInterproscan
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan
PF01436NHLNHL repeatRepeatInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF00169PHPH domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF12327FtsZ_CFtsZ family, C-terminal domainDomainInterproscan
PF00432PrenyltransPrenyltransferase and squalene oxidase repeatRepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03031NIFNLI interacting factor-like phosphataseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013098DomainImmunoglobulin I-setInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR050122FamilyReceptor Tyrosine KinaseInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR008266Active_siteTyrosine-protein kinase, active siteInterproscan
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR004087DomainK Homology domainInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR050952FamilyTripartite Motif and NHL Repeat Containing E3 LigasesInterproscan
IPR003649DomainB-box, C-terminalInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR016135Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR000608DomainUbiquitin-conjugating enzyme E2Interproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR018316DomainTubulin/FtsZ, 2-layer sandwich domainInterproscan
IPR024757DomainCell division protein FtsZ, C-terminalInterproscan
IPR037103Homologous_superfamilyTubulin/FtsZ-like, C-terminal domainInterproscan
IPR008280Homologous_superfamilyTubulin/FtsZ, C-terminalInterproscan
IPR000158FamilyCell division protein FtsZInterproscan
IPR045061FamilyTubulin-like protein FtsZ/CetZInterproscan
IPR003008DomainTubulin/FtsZ, GTPase domainInterproscan
IPR026873FamilyGeranylgeranyl transferase type-2 subunit betaInterproscan
IPR045089FamilyPrenyltransferase subunit betaInterproscan
IPR008930Homologous_superfamilyTerpenoid cyclases/protein prenyltransferase alpha-alpha toroidInterproscan
IPR001330RepeatPFTB repeatInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR023214Homologous_superfamilyHAD superfamilyInterproscan
IPR036412Homologous_superfamilyHAD-like superfamilyInterproscan
IPR011948DomainDullard phosphatase domain, eukaryoticInterproscan
IPR050365FamilyMitochondrial import inner membrane translocase subunit TIM50Interproscan
IPR004274DomainFCP1 homology domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24416TYROSINE-PROTEIN KINASE RECEPTORInterproscan
PTHR24104E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24020COLLAGEN ALPHAInterproscan
PTHR30314CELL DIVISION PROTEIN FTSZ-RELATEDInterproscan
PTHR11774GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNITInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR12210DULLARD PROTEIN PHOSPHATASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004714Molecular Functiontransmembrane receptor protein tyrosine kinase activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007169Biological Processcell surface receptor protein tyrosine kinase signaling pathwayInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0010976Biological Processpositive regulation of neuron projection developmentInterproscan
GO:0014068Biological Processobsolete positive regulation of phosphatidylinositol 3-kinase signalingInterproscan
GO:0017147Molecular FunctionWnt-protein bindingInterproscan
GO:0033674Biological Processpositive regulation of kinase activityInterproscan
GO:0043235Cellular Componentreceptor complexInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0032153Cellular Componentcell division siteInterproscan
GO:0051301Biological Processcell divisionInterproscan
GO:0004663Molecular FunctionRab geranylgeranyltransferase activityInterproscan
GO:0018344Biological Processprotein geranylgeranylationInterproscan
GO:0005968Cellular ComponentRab-protein geranylgeranyltransferase complexInterproscan
GO:0008318Molecular Functionprotein prenyltransferase activityInterproscan
GO:0018342Biological Processprotein prenylationInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0016791Molecular Functionphosphatase activityInterproscan
GO:0004721Molecular Functionphosphoprotein phosphatase activityInterproscan
GO:0008420Molecular FunctionRNA polymerase II CTD heptapeptide repeat phosphatase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22558COMMD2; COMM domain containing 2-Membrane traffickingko04131deepkoala
Ubiquitin systemko04121deepkoala

TOP