Detailed information of g27384.t2.1 in Dendrophyllia cribrosa

Genomic Location: :...
NR annotation: XP_027045746.1, uncharacterized protein LOC113673533 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A8TX70Collagen alpha-5(VI) chain OS=Homo sapiens OX=9606 GN=COL6A5 PE=1 SV=1
Q8VHI5Vitrin OS=Mus musculus OX=10090 GN=Vit PE=1 SV=2
A6H584Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a5 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00040fn2Fibronectin type II domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR000562DomainFibronectin type II domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP