Detailed information of g274.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012566791.2, arginine-glutamic acid dipeptide repeats protein isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9P2R6Arginine-glutamic acid dipeptide repeats protein OS=Homo sapiens OX=9606 GN=RERE PE=1 SV=2
Q80TZ9Arginine-glutamic acid dipeptide repeats protein OS=Mus musculus OX=10090 GN=Rere PE=1 SV=3
Q62901Arginine-glutamic acid dipeptide repeats protein OS=Rattus norvegicus OX=10116 GN=Rere PE=1 SV=2
Gene familySubfamily
Transcription Factors Familyzf-GATA

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01791DeoCDeoC/LacD family aldolaseDomainInterproscan
PF02410RsfSRibosomal silencing factor during starvation FamilyInterproscan
PF17781RPN1_RPN2_NRPN1 N-terminal domainDomainInterproscan
PF00433Pkinase_CProtein kinase C terminal domainFamilyInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF01448ELM2ELM2 domainFamilyInterproscan
PF03839Sec62Translocation protein Sec62FamilyInterproscan
PF00320GATAGATA zinc fingerDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF14222MOR2-PAG1_NCell morphogenesis N-terminalFamilyInterproscan
PF19421Fry_CFurry protein C-terminalDomainInterproscan
PF14228MOR2-PAG1_midCell morphogenesis central regionFamilyInterproscan
PF14225MOR2-PAG1_CCell morphogenesis C-terminalFamilyInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF12872OST-HTHOST-HTH/LOTUS domainDomainInterproscan
PF01936NYNNYN domainDomainInterproscan
PF00755Carn_acyltransfCholine/Carnitine o-acyltransferaseFamilyInterproscan
PF20939MsrA_helicalSelenoprotein methionine sulfoxide reductase A, helical domainDomainInterproscan
PF01625PMSRPeptide methionine sulfoxide reductaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011343FamilyDeoxyribose-phosphate aldolaseInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR002915FamilyDeoC/FbaB/LacD aldolaseInterproscan
IPR004394FamilyProtein Iojap/ribosomal silencing factor RsfSInterproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR040892DomainRPN1, N-terminalInterproscan
IPR017892DomainProtein kinase, C-terminalInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR000961DomainAGC-kinase, C-terminalInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR004728FamilyTranslocation protein Sec62Interproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR013088Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan
IPR017884DomainSANT domainInterproscan
IPR000949DomainELM2 domainInterproscan
IPR043151Homologous_superfamilyBromo adjacent homology (BAH) domain superfamilyInterproscan
IPR000679DomainZinc finger, GATA-typeInterproscan
IPR001025DomainBromo adjacent homology (BAH) domainInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR039808FamilyCadherinInterproscan
IPR025614DomainCell morphogenesis protein N-terminalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR039867FamilyProtein furry/Tao3/Mor2Interproscan
IPR045842DomainProtein furry, C-terminalInterproscan
IPR029473DomainCell morphogenesis central regionInterproscan
IPR025481DomainCell morphogenesis protein C-terminalInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR041966Homologous_superfamilyLOTUS-like domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR025605DomainOST-HTH/LOTUS domainInterproscan
IPR024768FamilyMeiosis regulator and mRNA stability factor 1Interproscan
IPR021139DomainNYN domainInterproscan
IPR000542FamilyAcyltransferase ChoActase/COT/CPTInterproscan
IPR039551DomainCholine/carnitine acyltransferase domainInterproscan
IPR042231Homologous_superfamilyCholine/Carnitine o-acyltransferase, domain 2Interproscan
IPR036509Homologous_superfamilyPeptide methionine sulphoxide reductase MsrA superfamilyInterproscan
IPR049006DomainSelenoprotein methionine sulfoxide reductase A, helical domainInterproscan
IPR002569DomainPeptide methionine sulphoxide reductase MsrA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10889DEOXYRIBOSE-PHOSPHATE ALDOLASEInterproscan
PTHR21043IOJAP SUPERFAMILY ORTHOLOGInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR1094326S PROTEASOME NON-ATPASE REGULATORY SUBUNITInterproscan
PTHR24351RIBOSOMAL PROTEIN S6 KINASEInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR12443TRANSLOCATION PROTEIN SEC62Interproscan
PTHR24027CADHERIN-23Interproscan
PTHR12295FURRY-RELATEDInterproscan
PTHR14379LIMKAIN B LKAPInterproscan
PTHR22589CARNITINE O-ACYLTRANSFERASEInterproscan
PTHR43774PEPTIDE METHIONINE SULFOXIDE REDUCTASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004139Molecular Functiondeoxyribose-phosphate aldolase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0009264Biological Processdeoxyribonucleotide catabolic processInterproscan
GO:0016829Molecular Functionlyase activityInterproscan
GO:0016052Biological Processcarbohydrate catabolic processInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0017148Biological Processnegative regulation of translationInterproscan
GO:0043023Molecular Functionribosomal large subunit bindingInterproscan
GO:0090071Biological Processnegative regulation of ribosome biogenesisInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008540Cellular Componentproteasome regulatory particle, base subcomplexInterproscan
GO:0034515Cellular Componentproteasome storage granuleInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0018105Biological Processpeptidyl-serine phosphorylationInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0015031Biological Processprotein transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0031204Biological Processpost-translational protein targeting to membrane, translocationInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan
GO:0000902Biological Processcell morphogenesisInterproscan
GO:0005938Cellular Componentcell cortexInterproscan
GO:0030427Cellular Componentsite of polarized growthInterproscan
GO:0031175Biological Processneuron projection developmentInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005777Cellular ComponentperoxisomeInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:1905762Molecular FunctionCCR4-NOT complex bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0004095Molecular Functioncarnitine O-palmitoyltransferase activityInterproscan
GO:0006635Biological Processfatty acid beta-oxidationInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan
GO:0008113Molecular Functionpeptide-methionine (S)-S-oxide reductase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04688RPS6KB; ribosomal protein S6 kinase betaEC:2.7.11.1
Pentose phosphate pathwayko00030deepkoala
Protein kinasesko01001deepkoala

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