Detailed information of g275.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_002163036.3, high-affinity choline transporter 1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9VE46High-affinity choline transporter 1 OS=Drosophila melanogaster OX=7227 GN=ChT PE=2 SV=2
O02228High-affinity choline transporter 1 OS=Caenorhabditis elegans OX=6239 GN=cho-1 PE=2 SV=2
Q9GZV3High affinity choline transporter 1 OS=Homo sapiens OX=9606 GN=SLC5A7 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyHSF
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14572Pribosyl_synthPhosphoribosyl synthetase-associated domainDomainInterproscan
PF13793Pribosyltran_NN-terminal domain of ribose phosphate pyrophosphokinaseDomainInterproscan
PF15903PL48Filopodia upregulated, FAM65FamilyInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF05527DUF758Domain of unknown function (DUF758) FamilyInterproscan
PF03071GNT-IGNT-I familyFamilyInterproscan
PF07779Cas1_AcylT10 TM Acyl Transferase domain found in Cas1pFamilyInterproscan
PF00474SSFSodium:solute symporter familyFamilyInterproscan
PF01237Oxysterol_BPOxysterol-binding protein FamilyInterproscan
PF00005ABC_tranABC transporterDomainInterproscan
PF00447HSF_DNA-bindHSF-type DNA-bindingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR005946FamilyRibose-phosphate pyrophosphokinaseInterproscan
IPR029057Homologous_superfamilyPhosphoribosyltransferase-likeInterproscan
IPR029099DomainRibose-phosphate pyrophosphokinase, N-terminal domainInterproscan
IPR000836DomainPhosphoribosyltransferase domainInterproscan
IPR031780DomainFAM65, N-terminalInterproscan
IPR026136FamilyRIPOR family member 3Interproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR050164FamilyUbiquitin carboxyl-terminal hydrolasesInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR038355Homologous_superfamilyTumor necrosis factor alpha-induced protein 8-like superfamilyInterproscan
IPR008477FamilyTumor necrosis factor alpha-induced protein 8-likeInterproscan
IPR004139FamilyGlycosyl transferase, family 13Interproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR052261FamilyGlycosyltransferase 13Interproscan
IPR037239Homologous_superfamilyOxysterol-binding protein superfamilyInterproscan
IPR012419DomainCas1p 10 TM acyl transferase domainInterproscan
IPR001734FamilySodium/solute symporterInterproscan
IPR052244FamilyHigh-affinity choline transporterInterproscan
IPR038377Homologous_superfamilySodium/glucose symporter superfamilyInterproscan
IPR000648FamilyOxysterol-binding proteinInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR000232DomainHeat shock factor (HSF)-type, DNA-bindingInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR027725FamilyHeat shock transcription factor familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47501TRANSPOSASE-RELATEDInterproscan
PTHR10210RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBERInterproscan
PTHR15829PROTEIN KINASE PKN/PRK1, EFFECTORInterproscan
PTHR24006UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR33244INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR12757TUMOR NECROSIS FACTOR INDUCED PROTEINInterproscan
PTHR10468PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASEInterproscan
PTHR45897HIGH-AFFINITY CHOLINE TRANSPORTER 1Interproscan
PTHR45136ABC TRANSPORTER DOMAIN-CONTAINING PROTEINInterproscan
PTHR10015HEAT SHOCK TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0004749Molecular Functionribose phosphate diphosphokinase activityInterproscan
GO:0009165Biological Processnucleotide biosynthetic processInterproscan
GO:0002189Cellular Componentribose phosphate diphosphokinase complexInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006015Biological Process5-phosphoribose 1-diphosphate biosynthetic processInterproscan
GO:0006164Biological Processpurine nucleotide biosynthetic processInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0008375Molecular Functionacetylglucosaminyltransferase activityInterproscan
GO:0003827Molecular Functionalpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activityInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006487Biological Processprotein N-linked glycosylationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005307Molecular Functioncholine:sodium symporter activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0008292Biological Processacetylcholine biosynthetic processInterproscan
GO:0015871Biological Processcholine transportInterproscan
GO:0008289Molecular Functionlipid bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K26390TNFAIP8; tumor necrosis factor alpha-induced protein 8-Purine metabolismko00230deepkoala
Glycosyltransferasesko01003deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala
Signaling proteins-deepkoala

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