Detailed information of g27632.t2 in Acropora digitifera

Genomic Location: chr13Alt:8263453...8265351
NR annotation: XP_015766850.1, PREDICTED: voltage-dependent T-type calcium channel subunit alpha-1I-like [Acropora digitifera]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9EQ60Voltage-dependent T-type calcium channel subunit alpha-1H OS=Rattus norvegicus OX=10116 GN=Cacna1h PE=2 SV=2
O88427Voltage-dependent T-type calcium channel subunit alpha-1H OS=Mus musculus OX=10090 GN=Cacna1h PE=1 SV=3
O95180Voltage-dependent T-type calcium channel subunit alpha-1H OS=Homo sapiens OX=9606 GN=CACNA1H PE=1 SV=4
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520
all species →		Ion_transIon transport proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043203
all species →		FamilyVoltage-gated cation channel calcium and sodiumInterproscan
IPR027359
all species →		Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR005821
all species →		DomainIon transport domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10037
all species →		VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001518
all species →		Cellular Componentvoltage-gated sodium channel complexInterproscan
GO:0005248
all species →		Molecular Functionvoltage-gated sodium channel activityInterproscan
GO:0005261
all species →		Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0008332
all species →		Molecular Functionlow voltage-gated calcium channel activityInterproscan
GO:0043005
all species →		Cellular Componentneuron projectionInterproscan
GO:0070509
all species →		Biological Processcalcium ion importInterproscan
GO:0086010
all species →		Biological Processmembrane depolarization during action potentialInterproscan
GO:0005216
all species →		Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811
all species →		Biological Processmonoatomic ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g27632.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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