Detailed information of g277.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: QNH72416.1, toxin candidate TRINITY_DN29374_c0_g2_i1 [Pachycerianthus maua]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q19269Zinc metalloproteinase nas-14 OS=Caenorhabditis elegans OX=6239 GN=nas-14 PE=2 SV=2
Q20176Zinc metalloproteinase nas-39 OS=Caenorhabditis elegans OX=6239 GN=nas-39 PE=2 SV=4
P98063Bone morphogenetic protein 1 OS=Mus musculus OX=10090 GN=Bmp1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF07289BBL5Bardet-Biedl syndrome 5 protein FamilyInterproscan
PF08172CASP_CCASP C terminalFamilyInterproscan
PF01412ArfGapPutative GTPase activating protein for ArfDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF07004SHIPPO-rptSperm-tail PG-rich repeatRepeatInterproscan
PF16794fn3_4Fibronectin-III type domainDomainInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR006606FamilyBardet-Biedl syndrome 5 proteinInterproscan
IPR012955DomainCASP, C-terminalInterproscan
IPR001164DomainArf GTPase activating proteinInterproscan
IPR038508Homologous_superfamilyArfGAP domain superfamilyInterproscan
IPR037278Homologous_superfamilyARFGAP/RecO-like zinc fingerInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR002464Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan
IPR010736RepeatSperm-tail PG-rich repeatInterproscan
IPR051291FamilyCiliary Microtubule AssociatedInterproscan
IPR026085FamilyActivating transcription factor 7-interacting proteinInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21351BARDET-BIEDL SYNDROME PROTEIN 5Interproscan
PTHR45686ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATEDInterproscan
PTHR18934ATP-DEPENDENT RNA HELICASEInterproscan
PTHR21580SHIPPO-1-RELATEDInterproscan
PTHR23210ACTIVATING TRANSCRIPTION FACTOR 7 INTERACTING PROTEINInterproscan
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0032266Molecular Functionphosphatidylinositol-3-phosphate bindingInterproscan
GO:0034464Cellular ComponentBBSomeInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0046907Biological Processintracellular transportInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0000139Cellular ComponentGolgi membraneInterproscan
GO:0006891Biological Processintra-Golgi vesicle-mediated transportInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0048205Biological ProcessCOPI coating of Golgi vesicleInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0090309Biological Processobsolete positive regulation of DNA methylation-dependent heterochromatin formationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14780DHX37, DHR1; ATP-dependent RNA helicase DHX37/DHR1EC:5.6.2.6
Membrane traffickingko04131deepkoala
Cilium and associated proteinsko03037deepkoala
Ribosome biogenesisko03009deepkoala

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