Detailed information of g27804.t1 in Montipora capitata

Genomic Location: xfSc0000059:149938...163083
NR annotation: XP_029199507.1, LOW QUALITY PROTEIN: integrin beta-1 [Acropora millepora]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P11584Integrin beta-PS OS=Drosophila melanogaster OX=7227 GN=mys PE=1 SV=3
O54890Integrin beta-3 OS=Mus musculus OX=10090 GN=Itgb3 PE=1 SV=2
Q8R2H2Integrin beta-3 OS=Rattus norvegicus OX=10116 GN=Itgb3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000809 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07965
all species →		Integrin_B_tailIntegrin beta tail domainDomainInterproscan
PF18372
all species →		I-EGF_1Integrin beta epidermal growth factor like domain 1DomainInterproscan
PF00362
all species →		Integrin_betaIntegrin beta chain VWA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015812
all species →		FamilyIntegrin beta subunitInterproscan
IPR036465
all species →		Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR012896
all species →		DomainIntegrin beta subunit, tailInterproscan
IPR040622
all species →		DomainIntegrin beta, epidermal growth factor-like domain 1Interproscan
IPR002369
all species →		DomainIntegrin beta subunit, VWA domainInterproscan
IPR036349
all species →		Homologous_superfamilyIntegrin beta tail domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10082
all species →		INTEGRIN BETA SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005178
all species →		Molecular Functionintegrin bindingInterproscan
GO:0005925
all species →		Cellular Componentfocal adhesionInterproscan
GO:0007160
all species →		Biological Processcell-matrix adhesionInterproscan
GO:0007229
all species →		Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305
all species →		Cellular Componentintegrin complexInterproscan
GO:0009986
all species →		Cellular Componentcell surfaceInterproscan
GO:0016477
all species →		Biological Processcell migrationInterproscan
GO:0033627
all species →		Biological Processcell adhesion mediated by integrinInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g27804.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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