Detailed information of g279.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAJ7371849.1, Vesicle-associated membrane protein [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZL74Vesicle-associated membrane protein 7 OS=Gallus gallus OX=9031 GN=VAMP7 PE=2 SV=1
Q9JHW5Vesicle-associated membrane protein 7 OS=Rattus norvegicus OX=10116 GN=Vamp7 PE=1 SV=1
P70280Vesicle-associated membrane protein 7 OS=Mus musculus OX=10090 GN=Vamp7 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12483GIDEE3 Ubiquitin ligaseFamilyInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF04388HamartinHamartin proteinFamilyInterproscan
PF00782DSPcDual specificity phosphatase, catalytic domainDomainInterproscan
PF00957SynaptobrevinSynaptobrevinFamilyInterproscan
PF13774LonginRegulated-SNARE-like domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF05994FragX_IPCytoplasmic Fragile-X interacting familyFamilyInterproscan
PF07159CYRIA-B_Rac1-bdCYRIA/CYRIB Rac1 binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR022170DomainE3 Ubiquitin ligase MUL1-likeInterproscan
IPR051652FamilyMDM2/MDM4 and MUL1Interproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR007483FamilyHamartinInterproscan
IPR000340DomainDual specificity phosphatase, catalytic domainInterproscan
IPR016130Active_siteProtein-tyrosine phosphatase, active siteInterproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR020422DomainDual specificity protein phosphatase domainInterproscan
IPR043587FamilyProtein phosphatase Slingshot-likeInterproscan
IPR000387DomainTyrosine-specific protein phosphatases domainInterproscan
IPR010908DomainLongin domainInterproscan
IPR001388FamilySynaptobrevin-likeInterproscan
IPR042855Domainv-SNARE, coiled-coil homology domainInterproscan
IPR011012Homologous_superfamilyLongin-like domain superfamilyInterproscan
IPR051097FamilySynaptobrevin-like vesicular transport proteinInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR036439Homologous_superfamilyDockerin domain superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR008081FamilyCytoplasmic FMR1-interactingInterproscan
IPR009828DomainCYRIA/CYRIB, Rac1 binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12183MITOCHONDRIAL UBIQUITIN LIGASE ACTIVATOR OF NFKB 1Interproscan
PTHR15154HAMARTINInterproscan
PTHR45864SLINGSHOT PROTEIN PHOSPHATASE HOMOLOGInterproscan
PTHR21136SNARE PROTEINSInterproscan
PTHR24026FAT ATYPICAL CADHERIN-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR12195CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0006996Biological Processorganelle organizationInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0008285Biological Processnegative regulation of cell population proliferationInterproscan
GO:0032007Biological Processnegative regulation of TOR signalingInterproscan
GO:0033596Cellular ComponentTSC1-TSC2 complexInterproscan
GO:0051726Biological Processregulation of cell cycleInterproscan
GO:0016311Biological ProcessdephosphorylationInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0004721Molecular Functionphosphoprotein phosphatase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016791Molecular Functionphosphatase activityInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030837Biological Processnegative regulation of actin filament polymerizationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0005484Molecular FunctionSNAP receptor activityInterproscan
GO:0006887Biological ProcessexocytosisInterproscan
GO:0006906Biological Processvesicle fusionInterproscan
GO:0031201Cellular ComponentSNARE complexInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0000272Biological Processpolysaccharide catabolic processInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0030833Biological Processregulation of actin filament polymerizationInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan
GO:0000340Molecular FunctionRNA 7-methylguanosine cap bindingInterproscan
GO:0000902Biological Processcell morphogenesisInterproscan
GO:0006417Biological Processregulation of translationInterproscan
GO:0031209Cellular ComponentSCAR complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05766SSH; protein phosphatase slingshotEC:3.1.3.16
EC:3.1.3.48
Exosomeko04147deepkoala
Human papillomavirus infectionko05165deepkoala
Protein phosphatases and associated proteinsko01009deepkoala

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