Detailed information of g28119.t1 in Montipora capitata

Genomic Location: xfSc0000100:631...10021
NR annotation: XP_015751596.1, PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein homolog [Acropora digitifera]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9CYF5RCC1-like G exchanging factor-like protein OS=Mus musculus OX=10090 GN=Rcc1l PE=1 SV=1
Q96I51RCC1-like G exchanging factor-like protein OS=Homo sapiens OX=9606 GN=RCC1L PE=1 SV=3
Q80YD6Secretion-regulating guanine nucleotide exchange factor OS=Mus musculus OX=10090 GN=Sergef PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006857 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00415
all species →
RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF13540
all species →
RCC1_2Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF01335
all species →
DEDDeath effector domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000408
all species →
RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR011029
all species →
Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR001875
all species →
DomainDeath effector domainInterproscan
IPR053035
all species →
FamilyMitochondrial GEF domain-containing proteinInterproscan
IPR009091
all species →
Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46337
all species →
RCC1-LIKE G EXCHANGING FACTOR-LIKE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0042981
all species →
Biological Processregulation of apoptotic processInterproscan
GO:0005085
all species →
Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005743
all species →
Cellular Componentmitochondrial inner membraneInterproscan
GO:0019843
all species →
Molecular FunctionrRNA bindingInterproscan
GO:0070131
all species →
Biological Processpositive regulation of mitochondrial translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g28119.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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