Detailed information of g28196.t1 in Acropora digitifera

Genomic Location: chr13Alt:16993764...16995697
NR annotation: XP_015766033.1, PREDICTED: RING finger protein 151-like isoform X3 [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097
all species →		zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001293
all species →		DomainZinc finger, TRAF-typeInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR018957
all species →		DomainZinc finger, C3HC4 RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10131
all species →		TNF RECEPTOR ASSOCIATED FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0005164
all species →		Molecular Functiontumor necrosis factor receptor bindingInterproscan
GO:0009898
all species →		Cellular Componentcytoplasmic side of plasma membraneInterproscan
GO:0033209
all species →		Biological Processtumor necrosis factor-mediated signaling pathwayInterproscan
GO:0070534
all species →		Biological Processprotein K63-linked ubiquitinationInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g28196.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP