Gene detail

Detailed information of g28268.t1 in Montipora capitata

Genomic Location: xfSc0000119:74525...83791
NR annotation: XP_044163058.1, uncharacterized protein LOC122947653 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

g28268.t1

atgactgaagttgtcaatttccttcagtcgcgtggcgtactgacagaagacgataaagaattgattttggccgaaaaaaatacctcgttaaaagtctttgaactcttagatatgcttgaacgaagtgggccaaacgcatttgatgctttcgtgcaagctcttaatagttccggctgtggattcgtcgtaaggtatcttcaatcggaattagcaggtgaatctcctgacatagatcctgaacaaatagtaacttgtcttggtctctctgaagagaagccaaaaatcattggaagaggggaagattgcgaaaaaatcacccaaacgttgacttcaggtgctcgaattttattaatcgttggccctccaggatttgggaagacagcagtggccatagctgtaggccacatgatgaaaggtcaagggaaagacatagtgtacatttctcttagaactgtgacatcagtggaagctgcagccaagaaaatgctcgagaagacctgcaaaaggaagatggcgcctcatttaatacttttttggatgcgatcagcagaggcaacaaatgttctaactcttgtgacaagcagaattcttttgtcaaaattggattatcacatcacaccggttgaatatccactgaggccactgactgaggaacagtcagttgtcttccttcagaatgaagatattccagatcaacaggccaccctcttctcacggcacaaggtctgtggtggtgtacccctactgctcaaaataacagcatcctttctgctgaaatcccagacaatcgatccagtagagcttcacagaagcctgcatgaatgcaaggatgaatttctcaggggaaagaatcctgaaatccaagagctacataggcgtcttgaggttttttacaactatttgccttcagacgttaggaaggccctctcatatttggctgcattcccaacagtcttcaagaaaggtgaagcaaaggaagtcttattcaaagagatgaagcctcttgattttgatttcattttgagtgcacttgaatcccattcacttgttgagcgagaggaggttgatggctgtttgcagtacagtttacatcccctggtgcaagctttctgtgttacaacaagagggagcctgtgtggaaatgagtacaatatggcgataaacctgttttcacagcatcatctcagacttttggaacaactgaatgatgattttgtctccacagattgcaaacctgccatagacaaataccagttaaacaaaacaaacatttgccatgcactcaatgcctcaaaagatggctgtttgaagcattttggtctcctcatttcaacaaagaccgtcaatttccttgcaaaatgtatgaacattaatgaattcatgtctatttatggcaacttgctaaatgttgtcaaaactctcccagataaaagactttacagcgagtgtcagttttccattggattcaaacaactttgttttcatggttacaaggatgcgcatcaaacaaatgcaataactaaccttcaagaagcacatgaactgcaaaagtctctgggaattaatgatgagtgccgtggtcaatgcgagtgcaaacttggcctttgcacttttgtagctggtgataagaagaaaggcatctcactcattgcgcgaggaattggtcggcggaaaacattagcacagagcagagatgcaggcaaaaaggaacagatgcttgtgggggctggatattctgaccttgcaatggccatgtatgacagtcagaaatacaaagcagctgtcaacatttggaaaaacatgtgtctcgtcaggtaccgcagattgctcggaacacacccattcactgcctctgtactggattacttggggaatgcttacctgaaactcagttgtgctcaggaagcagtgagatgcaagaaggagagtcttcagatgagatgctccttgttaggtgaagaccatttggacacggccagagcttattatggtctaggttgtgctcttgaagtcctgggttctactgaggaagctttgaaaaacttgagcaaggcatacagagtccaaactcgttttcatgcttccccgcaagacatcaagaaaacgaaacgtgaactggaccgtttgcaagaagtagttcgtttacaaaaagaccgaatgcctaatcatgttgcggcaatcgaagaattgctagttaactgtcacgtggtaccctcgttaaaataa

Transcript

g28268.t1

ATGACTGAAGTTGTCAATTTCCTTCAGTCGCGTGGCGTACTGACAGAAGACGATAAAGAATTGATTTTGGCCGAAAAAAATACCTCGTTAAAAGTCTTTGAACTCTTAGATATGCTTGAACGAAGTGGGCCAAACGCATTTGATGCTTTCGTGCAAGCTCTTAATAGTTCCGGCTGTGGATTCGTCGTAAGGTATCTTCAATCGGAATTAGCAGGTGAATCTCCTGACATAGATCCTGAACAAATAGTAACTTGTCTTGGTCTCTCTGAAGAGAAGCCAAAAATCATTGGAAGAGGGGAAGATTGCGAAAAAATCACCCAAACGTTGACTTCAGGTGCTCGAATTTTATTAATCGTTGGCCCTCCAGGATTTGGGAAGACAGCAGTGGCCATAGCTGTAGGCCACATGATGAAAGGTCAAGGGAAAGACATAGTGTACATTTCTCTTAGAACTGTGACATCAGTGGAAGCTGCAGCCAAGAAAATGCTCGAGAAGACCTGCAAAAGGAAGATGGCGCCTCATTTAATACTTTTTTGGATGCGATCAGCAGAGGCAACAAATGTTCTAACTCTTGTGACAAGCAGAATTCTTTTGTCAAAATTGGATTATCACATCACACCGGTTGAATATCCACTGAGGCCACTGACTGAGGAACAGTCAGTTGTCTTCCTTCAGAATGAAGATATTCCAGATCAACAGGCCACCCTCTTCTCACGGCACAAGGTCTGTGGTGGTGTACCCCTACTGCTCAAAATAACAGCATCCTTTCTGCTGAAATCCCAGACAATCGATCCAGTAGAGCTTCACAGAAGCCTGCATGAATGCAAGGATGAATTTCTCAGGGGAAAGAATCCTGAAATCCAAGAGCTACATAGGCGTCTTGAGGTTTTTTACAACTATTTGCCTTCAGACGTTAGGAAGGCCCTCTCATATTTGGCTGCATTCCCAACAGTCTTCAAGAAAGGTGAAGCAAAGGAAGTCTTATTCAAAGAGATGAAGCCTCTTGattttgatttcattttgaGTGCACTTGAATCCCATTCACTTGTTGAGCGAGAGGAGGTTGATGGCTGTTTGCAGTACAGTTTACATCCCCTGGTGCAAGCTTTCTGTGTTACAACAAGAGGGAGCCTGTGTGGAAATGAGTACAATATGGCGATAAACCTGTTTTCACAGCATCATCTCAGACTTTTGGAACAACTGAATGATGATTTTGTCTCCACAGATTGCAAACCTGCCATAGACAAATACCagttaaacaaaacaaacatttgccATGCACTCAATGCCTCAAAAGATGGCTGTTTGAAGCATTTTGGTCTCCTCATTTCAACAAAGACCGTCAATTTCCTTGCAAAATGTATGAACATTAATGAATTCATGTCTATTTATGGCAACTTGCTAAATGTTGTCAAAACTCTCCCAGATAAAAGACTTTACAGCGAGTGTCAGTTTTCCATTGGATTCAAACAACTTTGTTTTCATGGTTACAAGGATGCGCATCAAACAAATGCAATAACTAACCTTCAAGAAGCACATGAACTGCAAAAGTCTCTGGGAATTAATGATGAGTGCCGTGGTCAATGCGAGTGCAAACTTGGCCTTTGCACTTTTGTAGCTGGTGATAAGAAGAAAGGCATCTCACTCATTGCGCGAGGAATTGGTCGGCGGAAAACATTAGCACAGAGCAGAGATGCAGGCAAAAAGGAACAGATGCTTGTGGGGGCTGGATATTCTGACCTTGCAATGGCCATGTATGACAGTCAGAAATACAAAGCAGCTGTCAACATTTGGAAAAACATGTGTCTCGTCAGGTACCGCAGATTGCTCGGAACACACCCATTCACTGCCTCTGTACTGGATTACTTGGGGAATGCTTACCTGAAACTCAGTTGTGCTCAGGAAGCAGTGAGATGCAAGAAGGAGAGTCTTCAGATGAGATGCTCCTTGTTAGGTGAAGACCATTTGGACACGGCCAGAGCTTATTATGGTCTAGGTTGTGCTCTTGAAGTCCTGGGTTCTACTGAGGAAGCTTTGAAAAACTTGAGCAAGGCATACAGAGTCCAAACTCGTTTTCATGCTTCCCCGCAAGACATCAAGAAAACGAAACGTGAACTGGACCGTTTGCAAGAAGTAGTTCGTTTACAAAAAGACCGAATGCCTAATCATGTTGCGGCAATCGAAGAATTGCTAGTTAACTGTCACGTGGTACCCTCGttaaaataa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF00619	CARD	Caspase recruitment domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR001315	Domain	CARD domain	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47691	REGULATOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan