Detailed information of g28375.t1 in Acropora digitifera

Genomic Location: chr13Alt:19370112...19383686
NR annotation: XP_029210848.2, uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5VXM1CUB domain-containing protein 2 OS=Homo sapiens OX=9606 GN=CDCP2 PE=2 SV=2
O70244Cubilin OS=Rattus norvegicus OX=10116 GN=Cubn PE=1 SV=2
F1RWC3Cubilin OS=Sus scrofa OX=9823 GN=CUBN PE=1 SV=3
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00431
all species →		CUBCUB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000859
all species →		DomainCUB domainInterproscan
IPR050841
all species →		FamilyDevelopmental metalloproteases and endocytic receptorsInterproscan
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR035914
all species →		Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24251
all species →		OVOCHYMASE-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for g28375.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g28375.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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