Detailed information of g284.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: NP_001408752.1, protein transport protein Sec61 subunit alpha isoform 2 isoform 6 [Mus musculus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q98SN8Protein transport protein Sec61 subunit alpha isoform B OS=Oncorhynchus mykiss OX=8022 GN=sec61ab PE=2 SV=3
Q98SN9Protein transport protein Sec61 subunit alpha isoform A OS=Oncorhynchus mykiss OX=8022 GN=sec61aa PE=2 SV=3
Q25147Protein transport protein Sec61 subunit alpha OS=Halocynthia roretzi OX=7729 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01546Peptidase_M20Peptidase family M20/M25/M40FamilyInterproscan
PF07687M20_dimerPeptidase dimerisation domainDomainInterproscan
PF13417GST_N_3Glutathione S-transferase, N-terminal domainDomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF02214BTB_2BTB/POZ domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01702TGTQueuine tRNA-ribosyltransferaseFamilyInterproscan
PF00344SecYSecYFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR002933FamilyPeptidase M20Interproscan
IPR036264Homologous_superfamilyBacterial exopeptidase dimerisation domainInterproscan
IPR011650DomainPeptidase M20, dimerisation domainInterproscan
IPR017439FamilyAmidohydrolaseInterproscan
IPR034334FamilyProstaglandin E synthase 2Interproscan
IPR036282Homologous_superfamilyGlutathione S-transferase, C-terminal domain superfamilyInterproscan
IPR034335DomainProstaglandin E synthase 2, C-terminalInterproscan
IPR011767Active_siteGlutaredoxin active siteInterproscan
IPR004045DomainGlutathione S-transferase, N-terminalInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR040079FamilyGlutathione transferase familyInterproscan
IPR000569DomainHECT domainInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR044611FamilyUbiquitin-protein ligase E3A/B/C-likeInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR005821DomainIon transport domainInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR003968FamilyPotassium channel, voltage dependent, KvInterproscan
IPR003972FamilyPotassium channel, voltage dependent, Kv1Interproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR003131DomainPotassium channel tetramerisation-type BTB domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036511Homologous_superfamilyQueuine tRNA-ribosyltransferase-likeInterproscan
IPR050076FamilyArchaeosine Synthase Type 1/Queuine TRNA-RibosyltransferaseInterproscan
IPR002616DomaintRNA-guanine(15) transglycosylase-likeInterproscan
IPR004803FamilytRNA-guanine transglycosylaseInterproscan
IPR023201Homologous_superfamilySecY domain superfamilyInterproscan
IPR002208FamilySecY/SEC61-alpha familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11319G PROTEIN-COUPLED RECEPTOR-RELATEDInterproscan
PTHR11014PEPTIDASE M20 FAMILY MEMBERInterproscan
PTHR12782MICROSOMAL PROSTAGLANDIN E SYNTHASE-2Interproscan
PTHR33244INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR45700UBIQUITIN-PROTEIN LIGASE E3CInterproscan
PTHR11537VOLTAGE-GATED POTASSIUM CHANNELInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46499QUEUINE TRNA-RIBOSYLTRANSFERASEInterproscan
PTHR10906SECY/SEC61-ALPHA FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0050220Molecular Functionprostaglandin-E synthase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005249Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0005251Molecular Functiondelayed rectifier potassium channel activityInterproscan
GO:0008076Cellular Componentvoltage-gated potassium channel complexInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006813Biological Processpotassium ion transportInterproscan
GO:0051260Biological Processprotein homooligomerizationInterproscan
GO:0006400Biological ProcesstRNA modificationInterproscan
GO:0016763Molecular Functionpentosyltransferase activityInterproscan
GO:0002099Biological ProcesstRNA wobble guanine modificationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008616Biological Processqueuosine biosynthetic processInterproscan
GO:0008479Molecular FunctiontRNA-guanosine(34) queuine transglycosylase activityInterproscan
GO:0101030Biological ProcesstRNA-guanine transglycosylationInterproscan
GO:0015031Biological Processprotein transportInterproscan
GO:0005048Molecular Functionsignal sequence bindingInterproscan
GO:0005784Cellular ComponentSec61 translocon complexInterproscan
GO:0006616Biological ProcessSRP-dependent cotranslational protein targeting to membrane, translocationInterproscan
GO:0008320Molecular Functionprotein transmembrane transporter activityInterproscan
GO:0031204Biological Processpost-translational protein targeting to membrane, translocationInterproscan
GO:0043022Molecular Functionribosome bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00773tgt; queuine tRNA-ribosyltransferaseEC:2.4.2.29
Arachidonic acid metabolismko00590deepkoala
Glycosylphosphatidylinositol (GPI)-anchored proteinsko00537deepkoala
Ion channelsko04040deepkoala
Transfer RNA biogenesisko03016deepkoala

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