Detailed information of g28727.t1 in Montipora capitata

Genomic Location: xfSc0000235:17952...21023
NR annotation: XP_044177322.1, ubiquitin carboxyl-terminal hydrolase BAP1-like [Acropora millepora]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q66JB6Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus tropicalis OX=8364 GN=bap1 PE=2 SV=1
D3ZHS6Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Rattus norvegicus OX=10116 GN=Bap1 PE=1 SV=2
Q99PU7Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Mus musculus OX=10090 GN=Bap1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004546 (this species only)
Ubiquitin familyDUB|UCH|UCH · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01088
all species →
Peptidase_C12Ubiquitin carboxyl-terminal hydrolase, family 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036959
all species →
Homologous_superfamilyPeptidase C12, ubiquitin carboxyl-terminal hydrolase superfamilyInterproscan
IPR001578
all species →
DomainPeptidase C12, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR038765
all species →
Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10589
all species →
UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004843
all species →
Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0006511
all species →
Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0016579
all species →
Biological Processprotein deubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g28727.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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