Detailed information of g288.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: EDO35418.1, predicted protein [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8CBC7tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Mus musculus OX=10090 GN=Ftsj1 PE=1 SV=1
Q9UET6tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Homo sapiens OX=9606 GN=FTSJ1 PE=1 SV=2
Q22031Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Caenorhabditis elegans OX=6239 GN=R74.7 PE=3 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01728FtsJFtsJ-like methyltransferaseFamilyInterproscan
PF18100PDE4_UCRPhosphodiesterase 4 upstream conserved regions (UCR)DomainInterproscan
PF00233PDEase_I3'5'-cyclic nucleotide phosphodiesteraseDomainInterproscan
PF06089Asparaginase_IIL-asparaginase IIFamilyInterproscan
PF00100Zona_pellucidaZona pellucida-like domainFamilyInterproscan
PF13361UvrD_CUvrD-like helicase C-terminal domainDomainInterproscan
PF00580UvrD-helicaseUvrD/REP helicase N-terminal domainDomainInterproscan
PF07798CCDC90-likeCoiled-coil domain-containing protein 90-likeFamilyInterproscan
PF13561adh_short_C2Enoyl-(Acyl carrier protein) reductaseDomainInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF01435Peptidase_M48Peptidase family M48DomainInterproscan
PF03074GCSGlutamate-cysteine ligaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR015507FamilyRibosomal RNA large subunit methyltransferase EInterproscan
IPR002877DomainRibosomal RNA methyltransferase, FtsJ domainInterproscan
IPR028590FamilytRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase TRM7Interproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR050082FamilyRibosomal RNA large subunit methyltransferase RlmEInterproscan
IPR040844DomainPhosphodiesterase 4 upstream conserved regions (UCR)Interproscan
IPR002073Domain3'5'-cyclic nucleotide phosphodiesterase, catalytic domainInterproscan
IPR023174Conserved_site3'5'-cyclic nucleotide phosphodiesterase, conserved siteInterproscan
IPR036971Homologous_superfamily3'5'-cyclic nucleotide phosphodiesterase, catalytic domain superfamilyInterproscan
IPR023088Family3'5'-cyclic nucleotide phosphodiesteraseInterproscan
IPR010349FamilyL-asparaginase IIInterproscan
IPR001507DomainZona pellucida domainInterproscan
IPR042235Homologous_superfamilyZona pellucida, ZP-C domainInterproscan
IPR014017DomainUvrD-like DNA helicase, C-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014016DomainUvrD-like helicase, ATP-binding domainInterproscan
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR000212FamilyDNA helicase, UvrD/REP typeInterproscan
IPR004586FamilyRecBCD enzyme subunit RecBInterproscan
IPR011604Homologous_superfamilyPD-(D/E)XK endonuclease-like domain superfamilyInterproscan
IPR024461FamilyCoiled-coil domain-containing protein 90-likeInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR020904Conserved_siteShort-chain dehydrogenase/reductase, conserved siteInterproscan
IPR002347FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR051156FamilyMitochondrial and Outer Membrane MetalloproteaseInterproscan
IPR001478DomainPDZ domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR001915DomainPeptidase M48Interproscan
IPR004308FamilyGlutamate-cysteine ligase catalytic subunitInterproscan
IPR014746Homologous_superfamilyGlutamine synthetase/guanido kinase, catalytic domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10920RIBOSOMAL RNA METHYLTRANSFERASEInterproscan
PTHR11347CYCLIC NUCLEOTIDE PHOSPHODIESTERASEInterproscan
PTHR42110L-ASPARAGINASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G11890)-RELATEDInterproscan
PTHR14002ENDOGLIN/TGF-BETA RECEPTOR TYPE IIIInterproscan
PTHR11070UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBERInterproscan
PTHR14360UNCHARACTERIZEDInterproscan
PTHR48107NADPH-DEPENDENT ALDEHYDE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC-RELATEDInterproscan
PTHR22726METALLOENDOPEPTIDASE OMA1Interproscan
PTHR11164GLUTAMATE CYSTEINE LIGASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001510Biological ProcessRNA methylationInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0032259Biological ProcessmethylationInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0008175Molecular FunctiontRNA methyltransferase activityInterproscan
GO:0002181Biological Processcytoplasmic translationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan
GO:0004114Molecular Function3',5'-cyclic-nucleotide phosphodiesterase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0008081Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0004115Molecular Function3',5'-cyclic-AMP phosphodiesterase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0048471Cellular Componentperinuclear region of cytoplasmInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0000725Biological Processrecombinational repairInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0009338Cellular Componentexodeoxyribonuclease V complexInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0008854Molecular Functionexodeoxyribonuclease V activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0004357Molecular Functionglutamate-cysteine ligase activityInterproscan
GO:0006750Biological Processglutathione biosynthetic processInterproscan
GO:0017109Cellular Componentglutamate-cysteine ligase complexInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03582recB; exodeoxyribonuclease V beta subunitEC:3.1.11.5
Transfer RNA biogenesisko03016deepkoala
DNA repair and recombination proteinsko03400deepkoala

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