Detailed information of g28972.t1 in Montipora capitata

Genomic Location: xfSc0000310:17532...19758
NR annotation: XP_027038084.1, ectin-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
Q60519Semaphorin-5B OS=Mus musculus OX=10090 GN=Sema5b PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR050801FamilyCalcium-Dependent Lectins in Immunity and DevelopmentInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001304DomainC-type lectin-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22801LITHOSTATHINEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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