Detailed information of g291.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_115938285.1, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE [Aestuariispira insulae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B2SC50Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Brucella abortus (strain S19) OX=430066 GN=ubiE PE=3 SV=1
Q2YJM4Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Brucella abortus (strain 2308) OX=359391 GN=ubiE PE=3 SV=1
Q576Q0Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Brucella abortus biovar 1 (strain 9-941) OX=262698 GN=ubiE PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilybHLH
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01209Ubie_methyltranubiE/COQ5 methyltransferase familyFamilyInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF03462PCRFPCRF domainDomainInterproscan
PF00472RF-1RF-1 domainFamilyInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF06684AA_synthAmino acid synthesisFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF04636PA26PA26 p53-induced protein (sestrin)FamilyInterproscan
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF11987IF-2Translation-initiation factor 2DomainInterproscan
PF00155Aminotran_1_2Aminotransferase class I and IIDomainInterproscan
PF14604SH3_9Variant SH3 domainDomainInterproscan
PF01549ShKShK domain-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004033FamilyUbiE/COQ5 methyltransferaseInterproscan
IPR023576Conserved_siteUbiE/COQ5 methyltransferase, conserved siteInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR050057FamilyProkaryotic/Mitochondrial Release FactorInterproscan
IPR000352DomainPeptide chain release factor class IInterproscan
IPR005139DomainPeptide chain release factorInterproscan
IPR004373FamilyPeptide chain release factor 1Interproscan
IPR045853Homologous_superfamilyPeptide chain release factor class I superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR050359FamilyBasic helix-loop-helix transcription factorsInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR035936Homologous_superfamilyBB2672 superfamilyInterproscan
IPR009569FamilyAmino acid synthesis, putativeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR006730FamilySestrinInterproscan
IPR029032Homologous_superfamilyAhpD-likeInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR036925Homologous_superfamilyTranslation initiation factor IF-2, domain 3 superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR000178FamilyTranslation initiation factor IF-2, bacterial-likeInterproscan
IPR023115DomainTranslation initiation factor IF- 2, domain 3Interproscan
IPR015760FamilyTranslation initiation factor IF- 2Interproscan
IPR044145DomainTranslation initiation factor IF-2, domain IIInterproscan
IPR051326FamilyKynurenine--oxoglutarate transaminaseInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR004839DomainAminotransferase, class I/classIIInterproscan
IPR001452DomainSH3 domainInterproscan
IPR050384FamilyEndophilin/SH3RFInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR040115FamilyLunapark familyInterproscan
IPR003582DomainShKT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43591METHYLTRANSFERASEInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR43804LD18447PInterproscan
PTHR19290BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR12474P53 REGULATED PA26 NUCLEAR PROTEIN SESTRINInterproscan
PTHR43381TRANSLATION INITIATION FACTOR IF-2-RELATEDInterproscan
PTHR43807FI04487PInterproscan
PTHR14167SH3 DOMAIN-CONTAININGInterproscan
PTHR22166ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARKInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0006744Biological Processubiquinone biosynthetic processInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0003747Molecular Functiontranslation release factor activityInterproscan
GO:0006415Biological Processtranslational terminationInterproscan
GO:0016149Molecular Functiontranslation release factor activity, codon specificInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016239Biological Processpositive regulation of macroautophagyInterproscan
GO:0016684Molecular Functionoxidoreductase activity, acting on peroxide as acceptorInterproscan
GO:0070728Molecular FunctionL-leucine bindingInterproscan
GO:0071233Biological Processcellular response to L-leucineInterproscan
GO:1901031Biological Processregulation of response to reactive oxygen speciesInterproscan
GO:1904262Biological Processnegative regulation of TORC1 signalingInterproscan
GO:1990253Biological Processcellular response to leucine starvationInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0016212Molecular Functionkynurenine-oxoglutarate transaminase activityInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0071782Cellular Componentendoplasmic reticulum tubular networkInterproscan
GO:0071786Biological Processendoplasmic reticulum tubular network organizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02835prfA, MTRF1, MRF1; peptide chain release factor 1-Mitochondrial biogenesisko03029deepkoala
Translation factorsko03012deepkoala

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