Detailed information of g29100.t1 in Montipora capitata

Genomic Location: xfSc0000362:7746...12178
NR annotation: XP_044184103.1, zinc phosphodiesterase ELAC protein 2-like isoform X1 [Acropora millepora]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
F4J1H7tRNAse Z TRZ4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=TRZ4 PE=2 SV=1
Q8HY87Zinc phosphodiesterase ELAC protein 2 OS=Macaca fascicularis OX=9541 GN=ELAC2 PE=2 SV=1
Q9GL73Zinc phosphodiesterase ELAC protein 2 OS=Gorilla gorilla gorilla OX=9595 GN=ELAC2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002053 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13691
all species →
Lactamase_B_4tRNase Z endonucleaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036866
all species →
Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR027794
all species →
DomaintRNase Z endonucleaseInterproscan
IPR047151
all species →
FamilyZinc phosphodiesterase ELAC protein 2-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12553
all species →
ZINC PHOSPHODIESTERASE ELAC PROTEIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008033
all species →
Biological ProcesstRNA processingInterproscan
GO:0005739
all species →
Cellular ComponentmitochondrionInterproscan
GO:0042781
all species →
Molecular Function3'-tRNA processing endoribonuclease activityInterproscan
GO:0072684
all species →
Biological Processobsolete mitochondrial tRNA 3'-trailer cleavage, endonucleolyticInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g29100.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP