Detailed information of g29227.t1 in Acropora digitifera

Genomic Location: chr14Alt:1595313...1617448
NR annotation: XP_029189852.2, transient-receptor-potential-like protein [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9QUQ5Short transient receptor potential channel 4 OS=Mus musculus OX=10090 GN=Trpc4 PE=1 SV=1
Q9UBN4Short transient receptor potential channel 4 OS=Homo sapiens OX=9606 GN=TRPC4 PE=1 SV=1
P79100Short transient receptor potential channel 4 OS=Bos taurus OX=9913 GN=TRPC4 PE=2 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520
all species →		Ion_transIon transport proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002153
all species →		FamilyTransient receptor potential channel, canonicalInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR043136
all species →		Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR005821
all species →		DomainIon transport domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10117
all species →		TRANSIENT RECEPTOR POTENTIAL CHANNELInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005262
all species →		Molecular Functioncalcium channel activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0015279
all species →		Molecular Functionstore-operated calcium channel activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0034703
all species →		Cellular Componentcation channel complexInterproscan
GO:0051480
all species →		Biological Processregulation of cytosolic calcium ion concentrationInterproscan
GO:0070588
all species →		Biological Processcalcium ion transmembrane transportInterproscan
GO:0070679
all species →		Molecular Functioninositol 1,4,5 trisphosphate bindingInterproscan
GO:0005216
all species →		Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811
all species →		Biological Processmonoatomic ion transportInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g29227.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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